PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr015624.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 586aa    MW: 65768.5 Da    PI: 8.3919
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr015624.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11397441554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h + Er+RR+++N++f++L++llP+      +K +Ka++L+ A e++ sL
  Pbr015624.1 397 HMISERKRREKLNESFHKLKSLLPPG-----TKKDKASVLTSARECLTSL 441
                  8899********************97.....8*************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.47E-10392446No hitNo description
PROSITE profilePS5088814.621392441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-14394459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-16394463IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.2E-9397441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-13398447IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MTKRHKGRLK CSGEIQRDSH FPPLSMDTAF HLDEGSRANF LRLVMQSFGC FYICLWSYMP  60
PPSNCLFFLD GVYDEENQPS SSSGILARRL FDEYRLSVFK VLENECVPGF AFRNSFSFVE  120
LQEMDLQRLA SDDKQRQFYR TAVFMGCKSG EIELGLSNVS QINIKREMMR TWLPEVFQGQ  180
LSPHTEVASR SINGQQQYPA SSSSSSLRSL STMDSPEYSS LLFNIPTTTA TISHNIPELF  240
TQLSSNPLQP INTSSLEPLP TINLITTTSS TGATSPHQQA IQAISQIRNV QFPTPEIEDA  300
TMTRAILTVL SSSSYQPPPQ TNPPSSSSTT DRHLQTPKAS AFKSYNTSAL APRTQMGANL  360
RLQNMHKRSI SFLRSLNLMR LREGIQATRP TSSQLHHMIS ERKRREKLNE SFHKLKSLLP  420
PGTKKDKASV LTSARECLTS LKAQVAELSK RNQQLEARLL PLTSLGANEA AAAAGSSNER  480
VSLTVTRVST ESSPDQDEQI IDLQVILRSQ ESCTEDMVIR ILEFLKRVEN VSLMSMEANT  540
WISESNSNIN RVILRLRVDQ ETEWNEAAFQ EAVRRVVADL VRRID*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1400405ERKRRE
2401406RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr015624.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352670.10.0PREDICTED: putative transcription factor bHLH041
TrEMBLA0A498HVQ20.0A0A498HVQ2_MALDO; Uncharacterized protein
STRINGXP_009352670.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-57bHLH family protein