PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr015453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 361aa MW: 42544.9 Da PI: 4.6453 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 43.1 | 1.1e-13 | 120 | 205 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++ v L+e+ ++ +l+r++l+ +W ev+ k+ ++ ++er+ qCk+ ++ l+++ykk+ke +++ +ss+++yf+++e Pbr015453.1 120 EWTEHAVFMLLEVWGDRFLQLGRKSLRSDDWHEVAYKVsEALKIERTDGQCKSMLDMLKRKYKKEKEKMEEM-GLNSSKWAYFKKME 205 5*************************************77889***************************96.89999********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 9.7E-18 | 119 | 206 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence Send to blast |
MDDIVDDPRY HPKSYSASHH NSSGRRKIHI RNTQYARPLL NRYAEEDDYE LDDFDEGNGR 60 EDQYNDEEDK HRHGFNRNFD AEEDFERLPK KRKAKNLESR YEFAPRVMPN WEPGFRSEEE 120 WTEHAVFMLL EVWGDRFLQL GRKSLRSDDW HEVAYKVSEA LKIERTDGQC KSMLDMLKRK 180 YKKEKEKMEE MGLNSSKWAY FKKMEMLMAS SSRQEFGLAC GIDSGEYVFM NTRVYLERSN 240 GFDEMRDSPG ESETDDDENG NDDFDVFPPR MAGMHGGDGD EGSSYRVLAD SIHKFGEIYE 300 KIESSKRQQM RELEKMRKNF NKELELQKKQ ILERAQVEIA KIQEADDDDE TDVSVEDLSE 360 * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 185 | KRKYKKEKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr015453.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009352475.1 | 0.0 | PREDICTED: trihelix transcription factor ASIL2-like | ||||
TrEMBL | A0A498HUX2 | 0.0 | A0A498HUX2_MALDO; Uncharacterized protein | ||||
STRING | XP_009352475.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2441 | 34 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 3e-81 | Trihelix family protein |