PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr015119.3
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 334aa    MW: 37226.3 Da    PI: 5.4586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr015119.3genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.7e-09148190446
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                  +k+ rr  +N+ AA rsR+R+k++++ Le k+k +eae ++L 
  Pbr015119.3 148 SKKRRRQLRNKDAAVRSRERRKMYVKDLEIKSKYFEAECRRLG 190
                  6999**********************************98764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.4E-11143205No hitNo description
SMARTSM003384.1E-4144202IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117147189IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.38E-9149204No hitNo description
PfamPF001705.1E-8149190IPR004827Basic-leucine zipper domain
CDDcd147042.32E-13150201No hitNo description
PROSITE patternPS000360152167IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MELEADVGFL DEIDWDLWLE DASISNGLDH VFQLPNPPVT ATGSTPLPPS SSSSPSSTVE  60
EPDPPSNPSP DLLGAIETIL MKEDDFDANK VPLAESGPAN NEYYDQFLAD ILVNSPSTDR  120
DSNAFPDSDK DKFDRSPLTD DADDDPISKK RRRQLRNKDA AVRSRERRKM YVKDLEIKSK  180
YFEAECRRLG NLLQCCYAEN HALRLSLQMN NTYQHGHGGL ASKQESAVLF LELLLLGSLL  240
WCLDIMCLLA LPRTLMTLLL HLHPLKNVDV DGNKALGSVG QRPRGGSSKM FQLRSFSKSR  300
RCKSSRTKMK QSGLPWFLSV YVNSTLPPLM LIT*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr015119.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3739720.0KT373972.1 Pyrus pyrifolia cultivar mixueli putative bZIP transcription 60 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009372662.10.0PREDICTED: bZIP transcription factor 60
TrEMBLA0A109PLB10.0A0A109PLB1_PYRPY; Putative bZIP transcription 60
STRINGXP_009372662.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-16basic region/leucine zipper motif 60