PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014250.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 384aa    MW: 43337.8 Da    PI: 5.1269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014250.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.5e-19251581128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                  +p GfrFhPtd+el++++L ++  +++     ++ ++ i e+d++ k+ Pw   +++ +   e++++yfF++ +++++   r +r + + g+W+++ +
  Pbr014250.1  25 MPLGFRFHPTDQELISFFLYNRFLHREslmadCNNFNLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLKTRSQ--ARIKReIDAGGTWSESNS 120
                  699*******************9999978876566678****9873678899865443344488999*****988764..688884566899*98766 PP

          NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   k+v++  ++++ g k+ L + k  +   +  dW+++ey++
  Pbr014250.1 121 -KPVKDLqNEKALGKKRNLRYEK--EGCEHDGDWLLEEYSI 158
                  .66665438888********984..4444589*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-2118183IPR003441NAC domain
PROSITE profilePS5100525.64625184IPR003441NAC domain
PfamPF023654.7E-1526158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MEEEGYGGNV PLGSYKNPLL GSNGMPLGFR FHPTDQELIS FFLYNRFLHR ESLMADCNNF  60
NLIYEFDLFG KTPPWVVWEN FGGPGLEDQD LYFFCQLKTR SQARIKREID AGGTWSESNS  120
KPVKDLQNEK ALGKKRNLRY EKEGCEHDGD WLLEEYSILP SVVAGADDSD HEIGKVVLCR  180
LKKNSRSGNK KNCSNSTQQV NEQPAKKRAR KEVKEKPAKK KARKEVKRRP AKKKARNEVG  240
SQNTTSVITH TVEELQNCPS TSSAPVVPFD ETNYKMISDA INHDQQCISN IDGSTMPTNF  300
SDHDYVPVSF ASECGELLLK DEDFLLKNGE DMFFDLEDLL PPLDCGSAWS LEKLPQIDGT  360
QEPLPLDGMS CWNDCLWMGN CVQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr014250.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009371545.10.0PREDICTED: NAC domain-containing protein 83-like
TrEMBLA0A498IRZ70.0A0A498IRZ7_MALDO; Uncharacterized protein
STRINGXP_009371545.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.14e-14NAC domain containing protein 94