PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr014235.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 391aa MW: 44560.9 Da PI: 4.7813 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 65.2 | 2e-20 | 25 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 +p GfrFhPtd+el++++L ++v +++ + + i e+d++ k+ Pw +++ + e++++yfF++ + +++ r +r + + g+W+++ + k+v+ Pbr014235.1 25 MPLGFRFHPTDQELISFFLYNRVLHREYCE-NLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCHLKPRSQ--ARIKReIDAGGTWSESNS-KPVK 118 699************************777.88****9873678899865443344488999*****988765..68888456689**98766.6666 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g k+ L + k + + dW+++ey++ Pbr014235.1 119 DLqNEKAIGKKRNLRYEK--EGCEHDGDWLLEEYSI 152 5438889********984..4444589*******85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-23 | 18 | 177 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 26.816 | 25 | 178 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.6E-16 | 26 | 152 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence Send to blast |
MEEEGYGGIV PLGFYENQLL GFNGMPLGFR FHPTDQELIS FFLYNRVLHR EYCENLIYEF 60 DLFGKTPPWV VWENFGGPGL EDQDLYFFCH LKPRSQARIK REIDAGGTWS ESNSKPVKDL 120 QNEKAIGKKR NLRYEKEGCE HDGDWLLEEY SILPSVVGCA DDSDHEIGKV VLCRLKKNSR 180 NENKKNNSNS TQQVNEQPAK KRATKEVKEK PAKKRARKEE SEKPAKTKKR ARKEESEKPA 240 KTKARNEVRS PNTTSVITHT IEELQNCPST SSAPVLPFDE SNYKMISDAI NHDQQCISNI 300 DGSTMPANFS DHDYVPTSLA SEGDEPLLKD EDLLFDNGMF FDLDDLFAPL DCESAWSQEK 360 LLQIDETQVP LPLDGMNCWD DCLWMGNCVQ * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr014235.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009371540.1 | 0.0 | PREDICTED: NAC domain-containing protein 41-like | ||||
TrEMBL | A0A498IRZ7 | 0.0 | A0A498IRZ7_MALDO; Uncharacterized protein | ||||
STRING | XP_009371540.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-15 | NAC domain containing protein 94 |