PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 293aa    MW: 32238.5 Da    PI: 7.2809
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014170.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.11.3e-402788263
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                 +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  Pbr014170.1 27 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 88
                 7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027013.4E-342985IPR003851Zinc finger, Dof-type
ProDomPD0074783.0E-273085IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6463185IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103369IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MSAESLDMLV CSKSQQQQQD RKPRPQPEQA LKCPRCDSTN TKFCYYNNYS LSQPRYFCKS  60
CRRYWTKGGT LRNVPVGGGC RKNKRSSSTK RAQDQPLTPN SNPLPALGYD SNDLTLAFAR  120
LQRQQSCGGQ LGFDDHDHIT LLGNPTNAPD HNILGNPTSA PGFLDALRTG FLETHNGNFE  180
NLYNYGYGNG NGNLGEVEDC GGGMGIHHPF EEATTNSTTT AVTVTTMKQE LFNGQSESSN  240
KVLWGFPWQM NGGDHHSNMV GNGNHEYDSG RESWNGIASS WQHGLLHTTP LV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr014170.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352402.10.0PREDICTED: dof zinc finger protein DOF2.1-like
RefseqXP_009352403.10.0PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBLD9ZIX60.0D9ZIX6_MALDO; DOF domain class transcription factor
STRINGXP_009352402.10.0(Pyrus x bretschneideri)
STRINGXP_009352403.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.14e-49Dof family protein