PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014120.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 319aa    MW: 34837.5 Da    PI: 5.8365
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014120.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.42.3e-16145207163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e++ kre+rkq NRe+ArrsR+RK+ae eeL + +++L ae ++L++++e+lk ++++l+ e+
  Pbr014120.1 145 ERQMKREKRKQANRESARRSRLRKQAEYEELVKTCESLNAEKMSLQSKIEKLKGNSETLRLEN 207
                  799******************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-11144204No hitNo description
SMARTSM003387.0E-13145209IPR004827Basic-leucine zipper domain
PfamPF001709.8E-15145207IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.231147210IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-8148203No hitNo description
CDDcd147029.76E-15150196No hitNo description
PROSITE patternPS000360152167IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MLDNMDQDVT KKLKGSDGTA VPVGYDSPKD GNLVFEASKS LEQKVDGLTD GNDGNTEAEH  60
LTQRNNGSES MQSAENDVKV HTQVSPTTKG ETNENSKSVS GTAPPAVGYV GVSLRPPYET  120
IGISTAFVAP SAGSGFPFGA PVLDERQMKR EKRKQANRES ARRSRLRKQA EYEELVKTCE  180
SLNAEKMSLQ SKIEKLKGNS ETLRLENAAL RVLLNVLIEF LELLEKLKNA QAVTQGGIAS  240
VKIEVDLELP NDAKNIISNL GSVSRXXXXX XXXXXXXXXX XXXRNGELDR EKHESSMAEA  300
KFHQLLESNS RTDAVAAR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161167RRSRLRK
2161168RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr014120.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352348.10.0PREDICTED: common plant regulatory factor 1-like
RefseqXP_009352349.10.0PREDICTED: common plant regulatory factor 1-like
TrEMBLA0A498JPA20.0A0A498JPA2_MALDO; Uncharacterized protein
STRINGXP_009352348.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15470810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.28e-23G-box binding factor 3