PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013349.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 370aa    MW: 40536 Da    PI: 8.2148
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013349.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08158200455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   hn+ Er RR++i+ +   L+e++P+           a++L  A++YIksLq
  Pbr013349.1 158 LHNMSERMRRNKIRGKQKVLQEIIPNY---------QASMLDDAIKYIKSLQ 200
                  5*************************8.........6**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.23E-11149204No hitNo description
SuperFamilySSF474591.83E-13151210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-12151208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-5158200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-9160205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MRNQLPDWKT TIAKSSTTTT TTYEGEYSQG FPYENFGVLP IDSVVLDPPT DNAHWNNTSS  60
SISATAAAGG GDDHKHFQEI FQNLSNIQLD PLLQMQQPTP NIFSHDKEVM LCGLSLEKGE  120
FSGKTTTSHE METKPVILSG EFKPSKDERP KRRRATELHN MSERMRRNKI RGKQKVLQEI  180
IPNYQASMLD DAIKYIKSLQ LQVQMMSMGG GAVYQTPNLS FAGIQGTQMS QFKPYFPMGL  240
GLGTSNAYEI GMGLGMINMC YTTGLPTMSV HSATAALPLM SGPGVLPVNP QVQMQIPFLA  300
SQVMPSTTAA TSNMVQPRFA TNFSRIFNYA NQAGESSSPN TASDNEKVPF INQKSKVMAS  360
HVVTPTSNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013349.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028951759.10.0transcription factor bHLH69-like
TrEMBLA0A498HGS10.0A0A498HGS1_MALDO; Uncharacterized protein
STRINGXP_008340282.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2281233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.14e-19phytochrome interacting factor 3-like 5