PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr012639.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 696aa    MW: 79128.6 Da    PI: 5.8064
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr012639.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.52e-5661331128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s +
  Pbr012639.1   6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-Q 101
                  79****************************.99***************6434555777**************************************.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++vg+kktLv+y+grap+g +tdWvmheyrl
  Pbr012639.1 102 TRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133
                  999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-644158IPR003441NAC domain
PROSITE profilePS5100561.6916158IPR003441NAC domain
PfamPF023657.6E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GIRTDWVMHE YRLDERECET AQGLQVQDAY ALCRIFKKTA TGPKIGEHYG STSTTSYQLT  180
SDHSSSVNEL YSDGGRCEDF ESSSYPMQMN NACSSSPNFV HTNSLDDMGR KRDGKWTQFL  240
SKDAFNCSSS FSHISTHGNI PYPPSKVDIA LECARLQHRL SLPPLEVEDF SQVGLTDFKT  300
MQYSNPAPDT TNTETDALQE ILSVAHVSQE MINQSSNLVD QTWGGNYAPP ANDFSFMVDR  360
DAQYNQITGH MNSMRYVDDK TWGNSYTRSI EIGDLEDDFR MDNTAENLRW IGMSDKDLEK  420
SFTEEHKIVP IENISSFRRE EQEQQYEIQG ETGHHSGLIK ELNDNEANDD DFSLSFINED  480
PNENFLHDGN MDDYSPSPSF EVIEEIQVNH GMFVSTRQVA ETFFHQLMPS QTVKVHLNPV  540
FGQNFFVERV VAQKKSEDRG SLFERSKELV MEKFDGIAKS TRPWRKIAST LVCAVTLILM  600
HMIFSLGQHM EDEKLMDAFT RTTTATSVEE NGNSEISNKK KGLGLIKWSN KKEKVCLVNI  660
RGGNSCSVFL KKMGIFLTVS LALGTMWANH NIISP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-56215811168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr012639.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018506050.10.0PREDICTED: NAC domain-containing protein 86
TrEMBLA0A498HAI90.0A0A498HAI9_MALDO; Uncharacterized protein
STRINGXP_009370573.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44213460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-165NAC domain containing protein 28