PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr010132.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 360aa    MW: 41063.8 Da    PI: 5.2989
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr010132.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix69.56.5e-2243137186
     trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rWt++e+ +Lie++r +e+ ++rg+           +p+W+ vs+++r+rg++r p+qC+++w+nl  ++kki+++e + ++e++s +++ ++++
  Pbr010132.1  43 RWTQHETFVLIEGKRVVENVVQRGRrstsalgteNFEPKWDLVSSYCRQRGVSRWPVQCRKRWSNLLVDFKKIRNWEAQIKQEAESFWVMRNDMR 137
                  8*********************98555666666588*******************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.5E-1042133No hitNo description
PROSITE profilePS500906.43543109IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.603.6E-443109IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MELESMKHEA ASPRPDQPDK QQTPDGTGSL VSEDKTKITR HPRWTQHETF VLIEGKRVVE  60
NVVQRGRRST SALGTENFEP KWDLVSSYCR QRGVSRWPVQ CRKRWSNLLV DFKKIRNWEA  120
QIKQEAESFW VMRNDMRRER RLPGLFDREV YNVLVGKEVT AMEACPLALF MPGQTDAKDG  180
DGTEDATAEE EDEEEGPEKD LNGGRDDMAE DRLSSDFEES GQDETAKKSK NENLMQDSPA  240
KKSKNENLMQ DSPTKTVTTP MPNSGAIKEK LSLGSKTSGE NVYQEKWKQR RVSTDESEHS  300
NIDQLIKVLE RNSNMLNAQL EAHNINCHFE REQRKEQNNS ILVALGKVTD VLARIADKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr010132.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018506768.10.0PREDICTED: trihelix transcription factor ASR3-like
TrEMBLA0A498I3Y60.0A0A498I3Y6_MALDO; Uncharacterized protein
STRINGXP_009350619.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21653375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-71Trihelix family protein