PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr009056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 209aa MW: 23054.3 Da PI: 10.2186 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.2 | 2.6e-10 | 97 | 122 | 30 | 55 |
AP2 30 rfslgkfgtaeeAakaaiaarkkleg 55 r +lg+f+taeeAa+a+++a+++l+g Pbr009056.1 97 RKWLGTFDTAEEAARAYDEAALSLRG 122 68**********************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 15.448 | 47 | 130 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-11 | 47 | 136 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.35E-11 | 94 | 130 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 9.9E-17 | 94 | 130 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.5E-6 | 97 | 122 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.04E-15 | 97 | 129 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MSTVDALHLR DTALSLAVEP PSPPPGIPRP QTKHAAPVQA GAGKDPHFRG VRKXXXXXXX 60 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXKPRKWL GTFDTAEEAA RAYDEAALSL 120 RGPKAKTNFG NLALVPPHSL LLGGGSEMFW PPPPMYFMSG APAVAPIRSE YRGYKLENVD 180 AVGGQEEKKM RKDKKPFLFD LNLPAPLF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr009056.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009367783.1 | 7e-97 | PREDICTED: ethylene-responsive transcription factor 8-like | ||||
TrEMBL | A0A498IYX0 | 2e-88 | A0A498IYX0_MALDO; Uncharacterized protein | ||||
STRING | XP_009367783.1 | 3e-96 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF330 | 34 | 189 |