PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr008465.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 695aa    MW: 78884.6 Da    PI: 6.1925
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr008465.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.52e-5661331128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s +
  Pbr008465.1   6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-Q 101
                  79****************************.99***************6434555777**************************************.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++vg+kktLv+y+grap+g +tdWvmheyrl
  Pbr008465.1 102 TRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133
                  999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-644158IPR003441NAC domain
PROSITE profilePS5100561.6916158IPR003441NAC domain
PfamPF023657.6E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GIRTDWVMHE YRLDERECET AQGLQVQDAY ALCRIFKKTA TGPKIGEHYG STSTTNYQLT  180
SDHSSSVNEL YSDGGRCEDF ESSSYPMQMH NACSSSPNFV HKNSLDEMGR KRDGKWTQFL  240
SKEAFDCSSS FSPFPNHENI SHPPSKVDIA LECARLQHRL SLPPLEVEDF PQVGLTDFKT  300
KQYSNPALDT TSTETDALQE ILSVAHVSQE MVNQSSNLVD QTWGGNYAPP ANDFSFMVDR  360
DAHYNQITDH LNSMRYVDKK TWGNSYTRSI EIGDLKDDFR MENTAENLRW IGMSDKDLEK  420
SFTEEHKIIP IENISSFRGE EEEHNYEAQG GPGHRSGIIK ELNDNEANDD DFSLSFINED  480
PNENFLHDGN MDDYSTSPSF EVIEEVQVNH GMFVSTRQVA ETFFHQLVPS QTVKVHLNPV  540
FGQNLLVERV VTQTKSEGRG SFFERFKELV MEKFDGIAKS TKPWRKIAST LVCAVTLILM  600
HMIIYLGQHM EDGKLMDAFT TTTTATIVEE KGNSNISKKE GLGLIKWSNK KEKVCVVNIR  660
GGNTCSVFLK KMGIFLTVSL ALGTMWANHN IIPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-56215811168Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr008465.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018505280.10.0PREDICTED: NAC domain-containing protein 86-like
RefseqXP_018505281.10.0PREDICTED: NAC domain-containing protein 86-like
TrEMBLA0A498JA370.0A0A498JA37_MALDO; Uncharacterized protein
STRINGXP_009367106.10.0(Pyrus x bretschneideri)
STRINGXP_009367117.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44213460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-167NAC domain containing protein 28