PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr008379.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family TALE
Protein Properties Length: 838aa    MW: 91728 Da    PI: 8.2014
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr008379.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.7e-096546911954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  Pbr008379.1 654 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 691
                  564459******************************87 PP

2BELL98.45.8e-32503571472
         BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  e q+kkakLl ++eeV +r kqy++q+q+v++sFe vagl sa+pY+ +Al+a+SrhFrcL + i++q+
  Pbr008379.1 503 EYQQKKAKLLYMQEEVSRRCKQYHQQMQMVVASFESVAGLSSATPYICMALNAVSRHFRCLTNSIKDQL 571
                  789***************************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.4E-37402569IPR006563POX domain
PfamPF075262.9E-40407567IPR006563POX domain
PROSITE profilePS5007111.888632695IPR001356Homeobox domain
CDDcd000869.34E-11635696No hitNo description
SMARTSM003891.2E-7635699IPR001356Homeobox domain
SuperFamilySSF466891.92E-16637700IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.1E-27638699IPR009057Homeodomain-like
PfamPF059204.0E-18652691IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    Send to blast
MQVCASRFGC RQSSKLNSQT TVCGKVSTSS KRVPDKYSRH ESHVAQQSRR DKLRVHQTSS  60
PPHHLDNLAN NSGKLPLHPG LNPHIVQVRN VRNANLLYDP TMFSSEMLDF SINANAPLSA  120
HRITMACHDQ DLGAAQPAGE SQNFGNWRST LNPPQSLDWV NNYTSGYQDV VQSSLANSSA  180
DQISSHHVAQ KHLGGGAMHF SSPSLKYVNT LQDVVTSASQ GTQQDQLEMA SIVHQRIMEN  240
EFVRVPSYGN QSNTLRFNNA SNSWMDRQPI ENRHNWSSGG GGGLEFSTAN SVDEEMRTGM  300
SSDSNQQGLS LSLSSNPPSN KLPVAQLIGS QDLHASTDDD DDHHHALKDL QNSKMGKSSG  360
GYLCSITKPS IISKACGKSH QDIVGNSSTS AYRSTGPLGP FTGYATILKS SKFLKPAQQL  420
LDEFCRVSDS KILKTCEASE RMSGDVSASA SVSISIEAGN ATETEVVAKR NNSGASSSTF  480
YGSTEISSDG GAASISSESF WPEYQQKKAK LLYMQEEVSR RCKQYHQQMQ MVVASFESVA  540
GLSSATPYIC MALNAVSRHF RCLTNSIKDQ LKHTRKALGE EYMSSSVTAA GTAGCCSKGE  600
KNFAKLKYMG LGFQKHNKSG GGSLVGFSEP QQHVWRPQRG LPERSVAILR TWLFEHFLHP  660
YPTDTDKHML ATQTGLSRNQ VSNWFINARV RVWKPMVEEI HILETRGGSL ETGQDPINKD  720
GNSANEGTSS RPNNDHQLSM NVMPDRQLKC LGDAEQRNQD MKRSRLECQV SSSMDGGLMG  780
FVQDQRGGFE AGGLGAVSLT LGLRHGVESA QQQQQLQQHE DQLRRQLGGQ MIRDYVG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A4e-15641698158Homeobox protein Meis1
4xrs_B4e-15641698158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr008379.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009367039.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A498KB130.0A0A498KB13_MALDO; Uncharacterized protein
STRINGXP_009367039.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.13e-86BEL1-like homeodomain 8