PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr006919.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 418aa    MW: 47373.1 Da    PI: 7.4073
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr006919.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM145.72.5e-451002262128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  ppG+rF+P d elvv+yL kkv +++l+  + i ev++y+++P+ L  k  k +ekewyfF++rd+ky++g+r++ra+ +gyWkatg dk v+s++g+
  Pbr006919.1 100 PPGYRFNPFDGELVVHYLMKKVLDQPLPP-NRIFEVNLYRHNPEVLAeKYEKYGEKEWYFFTPRDRKYRNGSRPKRAAGDGYWKATGADKGVKSSDGA 196
                  9*************************999.77**************9344455899****************************************** PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +vg +k Lvfy+g+ pkg kt+W+mhe+r+
  Pbr006919.1 197 VVGWRKALVFYRGKPPKGDKTNWIMHEFRV 226
                  ****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.89E-5597253IPR003441NAC domain
PROSITE profilePS5100553.62599253IPR003441NAC domain
PfamPF023656.2E-24100226IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MSSPSKSPSM VPVGQSHPHH KVSVATITQQ VASYSLSPKK QSPAQGDQGQ FTPANESGAS  60
LTTNVSAAAD GADHDLSEDE ANSFNNNLKK DQDEFFNSFP PGYRFNPFDG ELVVHYLMKK  120
VLDQPLPPNR IFEVNLYRHN PEVLAEKYEK YGEKEWYFFT PRDRKYRNGS RPKRAAGDGY  180
WKATGADKGV KSSDGAVVGW RKALVFYRGK PPKGDKTNWI MHEFRVKDSP VRRRRGENDM  240
RLDNWVLCRI YKKDKNGKRC DGRNHAEMIS PFSHRMNDEI MEIEMRGDIV DPLPEYDPAL  300
EYDHKYSNKA YSHMASLPNI CGRIPVNMIC NNQIQSVDAA SMNASCYANM EHSQLLCVRP  360
PSMSSESVLG PYRYIDESTI LPDDMMFDMK GFGHSLYSTN NYAAQFSSLD HVFPYTE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-539825916171NO APICAL MERISTEM PROTEIN
1ut4_B2e-539825916171NO APICAL MERISTEM PROTEIN
1ut7_A2e-539825916171NO APICAL MERISTEM PROTEIN
1ut7_B2e-539825916171NO APICAL MERISTEM PROTEIN
3swm_A3e-539825919174NAC domain-containing protein 19
3swm_B3e-539825919174NAC domain-containing protein 19
3swm_C3e-539825919174NAC domain-containing protein 19
3swm_D3e-539825919174NAC domain-containing protein 19
3swp_A3e-539825919174NAC domain-containing protein 19
3swp_B3e-539825919174NAC domain-containing protein 19
3swp_C3e-539825919174NAC domain-containing protein 19
3swp_D3e-539825919174NAC domain-containing protein 19
4dul_A2e-539825916171NAC domain-containing protein 19
4dul_B2e-539825916171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr006919.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018505100.10.0PREDICTED: NAC domain-containing protein 26-like
TrEMBLA0A498IL550.0A0A498IL55_MALDO; Uncharacterized protein
STRINGXP_009366118.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101121642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-51NAC domain containing protein 32