PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr006217.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 969aa    MW: 108622 Da    PI: 9.9295
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr006217.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.36.8e-149891289
                 HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE......EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
           B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr......yvltkGWkeFvkangLkegDfvvFkldgrse 89
                 +++ +++p +fa+e+g+ + +  +l+l+d++gr W v l  ++++ +       + tkGW +F  +n Lkeg++++Fkl++ ++
  Pbr006217.1  9 SKAYVTIPARFARENGLHSIS--KLILNDPRGRLWPVSLGRWGSRVKavdhrlAINTKGWYKFYASNSLKEGEVCLFKLKR-MS 89
                 567799*********998544..8***************665555555554455556*********************976.44 PP

2B352.11.1e-16170255899
                  -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  s  l+s rl +p +f+++++g +  s  + l  +sg  W+v+l   ++ g+ +l  GW  Fv+++ ++ gDf+vF++d + +f  +v +f++
  Pbr006217.1 170 SADLSSERLKIPDRFMRHMEGRT--SGLVLLFGPSGSAWSVEL--IQQNGGLFLHHGWPAFVRDHYVECGDFLVFSYDADLCF--TVLIFDQ 255
                  56788999********8888884..4489999***********..888889**************************999999..9999987 PP

3B343.46.2e-143994781496
                  T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                    l +p kf  +h   ++++++++l++ +g+sW+v+    ++   +++l +GW  Fv+ n+++ gD+++F+l+++ ef  +v++
  Pbr006217.1 399 YTLNIPYKFSVAHL--PNCKVKIVLQNWKGESWTVNSVPsTRVHTSHTLCGGWMAFVRCNDIQLGDICIFELVRECEF--RVHI 478
                  4689*****99996..45999***************9445555667999************************99999..4544 PP

4B341.32.7e-13605697196
                  EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                  f+k++++ + + s  l +p +f +e+  +     ++++ l++++g  W+v+   + k++  +++ +GW  Fv+ n+++ gD+++F+l+g++e  + v+
  Pbr006217.1 605 FVKIMKKFNISGSYTLKVPYQFSTEYlpN----YKTEILLRNSKGGCWTVNSVPDSKGRVvHTFCGGWMAFVRGNDINFGDVCIFELVGKDE--MQVH 696
                  6777877788888899**********533....4468***************5544444379999**********************98544..4555 PP

                  E CS
           B3  96 v 96 
                  +
  Pbr006217.1 697 I 697
                  5 PP

5B3581.8e-187268061299
                  HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +++ l++p  f++++gg   + ++ tl+++sg  W vkl  ++k ++ +++kGWk Fvk++ L+ gDf+vF++ g sef   v++f++
  Pbr006217.1 726 SKH-LRIPSAFIKNFGGR--SLRKCTLRNPSGDCWGVKL--KQKEDGLFFRKGWKVFVKDHFLEHGDFLVFEYRGGSEF--DVTIFDR 806
                  444.9*******999988..5568***************..9*******************************988888..9999997 PP

6B338.71.8e-12864956798
                  .-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   7 psdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +   +++++l++pk+ a +       g++  +  t+tl+d++grsW  +l + + + r+ +++GW   vka ++  gD +v+++++  ++ l +++fr
  Pbr006217.1 864 TLKKFNRNILTIPKHVAIAEglvsdaGLP--SRETVTLQDPTGRSWLAQL-HVRADHRVQMARGWAACVKATEISPGDDIVLEFVK--RGVLQLHIFR 956
                  35789999********9888888886666..4459***************.56666789999*********************876..4555888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.4491100IPR003340B3 DNA binding domain
SMARTSM010190.0022493IPR003340B3 DNA binding domain
SuperFamilySSF1019362.16E-13590IPR015300DNA-binding pseudobarrel domain
CDDcd100176.30E-11787No hitNo description
Gene3DG3DSA:2.40.330.101.1E-14889IPR015300DNA-binding pseudobarrel domain
PfamPF023621.7E-11888IPR003340B3 DNA binding domain
SuperFamilySSF1019366.87E-22160258IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.2E-21161258IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.93163256IPR003340B3 DNA binding domain
CDDcd100175.22E-17163254No hitNo description
SMARTSM010194.8E-11165256IPR003340B3 DNA binding domain
PfamPF023629.2E-15170255IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.8E-21379480IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.67E-23379479IPR015300DNA-binding pseudobarrel domain
CDDcd100174.83E-17384478No hitNo description
PROSITE profilePS5086313.155386482IPR003340B3 DNA binding domain
SMARTSM010191.7E-11386482IPR003340B3 DNA binding domain
PfamPF023627.4E-11399478IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.4E-20597698IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.04E-21598699IPR015300DNA-binding pseudobarrel domain
CDDcd100172.78E-16603697No hitNo description
PROSITE profilePS5086312.506605701IPR003340B3 DNA binding domain
SMARTSM010192.0E-11605703IPR003340B3 DNA binding domain
PfamPF023621.1E-10605697IPR003340B3 DNA binding domain
PROSITE profilePS5086314.551714807IPR003340B3 DNA binding domain
SuperFamilySSF1019365.3E-22715812IPR015300DNA-binding pseudobarrel domain
SMARTSM010195.9E-16716807IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.4E-23719809IPR015300DNA-binding pseudobarrel domain
CDDcd100175.30E-18725805No hitNo description
PfamPF023629.5E-16726806IPR003340B3 DNA binding domain
SuperFamilySSF1019368.24E-15854957IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.7E-14854957IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.307858958IPR003340B3 DNA binding domain
CDDcd100171.55E-9861956No hitNo description
SMARTSM010193.5E-9861958IPR003340B3 DNA binding domain
PfamPF023625.3E-10864957IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 969 aa     Download sequence    Send to blast
MAKTHGCVSK AYVTIPARFA RENGLHSISK LILNDPRGRL WPVSLGRWGS RVKAVDHRLA  60
INTKGWYKFY ASNSLKEGEV CLFKLKRMSR SISTAFMDVE ITPRRSESAV DFSEIQWYVA  120
LSVRDLAQSR ATRRRETTPH VLQRAPGAKL ISMAKEARNV RSPHFFAFYS ADLSSERLKI  180
PDRFMRHMEG RTSGLVLLFG PSGSAWSVEL IQQNGGLFLH HGWPAFVRDH YVECGDFLVF  240
SYDADLCFTV LIFDQSACEK EAAFRFGYGQ DSSNFEKCKY VGRKRGREEA ASSGYKLVDG  300
AAKKVRNGLS QLQSECIDEG REDATCSKET NPHEKPGLDV VPNTAKASIQ NMCGIGDGLN  360
VSGRVCMQMS SAHEVAPVFS SSNPYFVRII KSFNISGSYT LNIPYKFSVA HLPNCKVKIV  420
LQNWKGESWT VNSVPSTRVH TSHTLCGGWM AFVRCNDIQL GDICIFELVR ECEFRVHIQK  480
GETSSWLSPG QAVTTHKTIK GLSKKIKGNS PKVHSKSIRE IADKLSSKMY QDPAFVNDTR  540
KYGSTSRSLT KVALSQSKVA SKKLVNRRKK VVEDELDSQK RGLRIKLTLD EERVARSFTS  600
CFPNFVKIMK KFNISGSYTL KVPYQFSTEY LPNYKTEILL RNSKGGCWTV NSVPDSKGRV  660
VHTFCGGWMA FVRGNDINFG DVCIFELVGK DEMQVHISGV GANMDEKLKE PLVTPAFRAL  720
LVGDFSKHLR IPSAFIKNFG GRSLRKCTLR NPSGDCWGVK LKQKEDGLFF RKGWKVFVKD  780
HFLEHGDFLV FEYRGGSEFD VTIFDRTCCE KNVEEAARRA SSNLADSRTV DDVVRIERPA  840
SVHLAETSTG SVLFKSENTW FTKTLKKFNR NILTIPKHVA IAEGLVSDAG LPSRETVTLQ  900
DPTGRSWLAQ LHVRADHRVQ MARGWAACVK ATEISPGDDI VLEFVKRGVL QLHIFRGNVL  960
LTSPDVSD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr006217.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009365640.10.0PREDICTED: B3 domain-containing protein Os01g0723500-like
TrEMBLA0A498J6W40.0A0A498J6W4_MALDO; Uncharacterized protein
STRINGXP_009365640.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114703238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.13e-18B3 family protein