PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr006046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 223aa MW: 24189.4 Da PI: 9.8339 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 71.9 | 9.7e-23 | 78 | 140 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++e+krerrkq+NRe+ArrsR+RK+ae+eeL++ v++L+a+N aLk+e+++l++++a+lk e+ Pbr006046.1 78 DREIKRERRKQSNRESARRSRLRKQAETEELAQQVDALSAKNVALKSEINRLTENSATLKLEK 140 689********************************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-18 | 72 | 137 | No hit | No description |
SMART | SM00338 | 1.8E-19 | 78 | 142 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-20 | 79 | 140 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.53 | 80 | 143 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-11 | 81 | 137 | No hit | No description |
CDD | cd14702 | 5.99E-19 | 83 | 131 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 85 | 100 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MRPGPVSAKE ANAATDKVLG VTIAAANIPG KVVGPAVFPG VTTVLELNNP PILNSKTSPT 60 CVPQSCAVLP PETWIDNDRE IKRERRKQSN RESARRSRLR KQAETEELAQ QVDALSAKNV 120 ALKSEINRLT ENSATLKLEK TTLLDKLKNA RAGRMEDIIM NIDDKRVQPF STENLLSRVN 180 NAGSVARDAE KDGDNDMYEK NKGAKLHQLL DTSPRADAVA AG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 100 | RRSRLRK |
2 | 94 | 101 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr006046.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009350192.1 | 1e-160 | PREDICTED: common plant regulatory factor 1-like, partial | ||||
Swissprot | Q99089 | 6e-65 | CPRF1_PETCR; Common plant regulatory factor 1 | ||||
TrEMBL | A0A498JFV9 | 1e-147 | A0A498JFV9_MALDO; Uncharacterized protein | ||||
STRING | XP_009350192.1 | 1e-159 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF27733 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 4e-43 | G-box binding factor 3 |
Publications ? help Back to Top | |||
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