PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr005861.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 528aa    MW: 57569.4 Da    PI: 7.3521
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr005861.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.7e-11387445563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +  +l+  + +l+se+
  Pbr005861.1 387 KRAKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQFTSLQRDSVSLTSEN 445
                  9**************************************************99999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-17383447IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.0E-9384441No hitNo description
PROSITE profilePS5021710.726385448IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.7E-11387442No hitNo description
PfamPF001701.3E-9387445IPR004827Basic-leucine zipper domain
CDDcd147032.43E-22388437No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MEGSDETGSA KQQRPNPTFG SSSFLIPKPN SNLDIPNFNP SQMGFRMSPE SSKRPGIPPS  60
HPNNHNSMPF SRPQSGSWQL GQQNFSSGSS HTRSMSQPPF FSLDSLPPLS PLTYREPSAP  120
SLSDQNSVDV SMGESVVNSH GPTLRSPVNE STAYRAGDGL PPRRGHRRSN SDVPLGFSAI  180
NQPSPQLIPV RRRTSFDGSA SAKPIQLMKQ GSNGNAEGVD DRKSGGEVVD DLFNAYMNLE  240
NIDQMNLSGN EDKDIDSRAS ASKTNGGESS DNEVESGLNG NRNGAGVQRP GSGFPNERRE  300
GLKRTASGDV VSSARHCRSI SMDSYMENLN FDDEPLKPLG QQSPSTSLDG NSAKFSMEFG  360
SGEFNAIELK KIMESEKLAE IALSDPKRAK RILANRQSAA RSKERKMRYI VELEHKVQTL  420
QTEATTLSAQ FTSLQRDSVS LTSENNELKF RLQSLEQQAK LKDALNEALT GEVQRLKLAA  480
AELSGEGHLS NQTQQNTQPQ QFMQPQQNRQ PSHRQNSNAA AKPELNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr005861.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009335350.10.0PREDICTED: transcription factor RF2a-like
TrEMBLA0A498HRB80.0A0A498HRB8_MALDO; Uncharacterized protein
STRINGXP_009335350.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-115bZIP family protein