PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr004681.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 385aa    MW: 40828.8 Da    PI: 8.5712
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr004681.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.11.1e-3942102262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+al+cprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk +
  Pbr004681.1  42 PEQALNCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIR 102
                  6899******************************************************865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-244394IPR003851Zinc finger, Dof-type
PfamPF027013.4E-3344100IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.35746100IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104884IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MMSSDTAPPT KPKHDENPTG GSGSSRPKAT SSSSSGPKLP PPEQALNCPR CDSPNTKFCY  60
YNNYSLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKK IRSSSSSNSR LSCSFDPSKD  120
SAGSSSSENM MLGGLKFFHG ISPAMDFQLG SISRLHNSNQ FSTNLATGIN FNNPFPAFGD  180
VSGTSGLSTS TLEPSSGGGT NACNNSFLGF NYPLTLGGRG GSASGSGGLI SAQNMMSAMN  240
VHSSLASSIE SLSSINQDLH WKLQQQRLAM LFGTEEHDQS TQSQLENQQK TQQMIAPISL  300
FQNLEVSSSP RPDHHQGVSH GRKEGGDTAT EWFFGNSYAP AVTQTPTNSG GGGGGGASNE  360
NASNWPHGIP AWSSHDWQQY NVLP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr004681.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009364798.10.0PREDICTED: dof zinc finger protein DOF5.7
TrEMBLA0A498HTP40.0A0A498HTP4_MALDO; Uncharacterized protein
STRINGXP_009364798.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.14e-30DOF zinc finger protein 1