PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr004364.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 487aa    MW: 53270.7 Da    PI: 6.6839
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr004364.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.7e-15282340361
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                  + kr rr+ +NRe+ArrsR+RK+a +  Le  v +L  eN++L k+l    +++ k   
  Pbr004364.1 282 DAKRVRRMLSNRESARRSRRRKQAHLTDLEGQVSQLRVENSSLLKRLTDSDEKYNKAAV 340
                  689********************************************999999887655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.7E-12279336No hitNo description
SMARTSM003388.0E-19280344IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944282328IPR004827Basic-leucine zipper domain
PfamPF001701.1E-13283337IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-11284331No hitNo description
PROSITE patternPS000360287302IPR004827Basic-leucine zipper domain
PfamPF124987.6E-42351479IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MDRVFSVEEM SDQLWSSTAP ADNGGADDDN LSKLNRSASE WAFQRFLQEA SPYSPSPSPT  60
PPPPPHPSSS STAHHHDQND VEQIKMINAH HHNPTHTHYN NMRPPNVTVD SDEYRAFLKT  120
KLDLACAAVA LSEIKMVNTH DYNPTHTHYN NMRPPNVTVN SDEYRAFLKT KLDLACAAVA  180
LSREGSLVKA QESAALADSG SHASSTSQLG SEAPSKGAGY DLSRSNDKNA HAPLGAIPSL  240
PATKYRSAIP VRQATSGSSR EMTDDEEAEG ETAMNENMDP ADAKRVRRML SNRESARRSR  300
RRKQAHLTDL EGQVSQLRVE NSSLLKRLTD SDEKYNKAAV DNRVLKADIE TLRAKVKMAE  360
EMVKRFTGSN PMFHATSEVS SIGMPPFDGS PSEASIDAAV PEQDDPNHHF FQPASSNNPI  420
PTHDPRVKND SADVPSVENV QKNSAATSSA DVSGKKMGRT PSLQRVASLE HLQKRIRGGN  480
PSNWEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1296303RRSRRRKQ
2298303SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr004364.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009364595.10.0PREDICTED: light-inducible protein CPRF2 isoform X1
SwissprotQ990901e-120CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A498IKC40.0A0A498IKC4_MALDO; Uncharacterized protein
STRINGXP_009364595.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.25e-63bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]