PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr003628.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 388aa    MW: 40942 Da    PI: 8.5693
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr003628.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.2e-3942101261
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk 
  Pbr003628.1  42 PEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKI 101
                  6899*****************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.5E-3344100IPR003851Zinc finger, Dof-type
ProDomPD0074788.0E-2845100IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.43246100IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104884IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MMSSDAAQPA KPKDDENPTG GSGGSRPKTT SSSSSGPKLP PPEQALKCPR CDSPNTKFCY  60
YNNYSLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKK IRRSSSSSNS RLSCSFDSSK  120
DSAGSSSSEN MMLGGLKFFH GISPAMDFQL GSISRLHNNN QFSSNPAAGI NFNNPFSAFG  180
DVSGTSGLNI STLEPSAGGG TNACNNSFLG FNYPLTLGGG GGGASGSGGL ISTQNMMSAM  240
NVHSSLASSI ESLSSINQDL HWKMQQQRLA MLIGTEEHDQ STHSTQSQLE NQQKTQQMIT  300
PISLFQNLEV SSSSKPDHHQ GVNHGRKEGG DTATEWFFGN TYAAPVTPTP TNSGGGGGAG  360
GNENASNWPH GIPAWSSHDL QQYNALP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr003628.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009364234.10.0PREDICTED: dof zinc finger protein DOF5.7-like
TrEMBLA0A498KI060.0A0A498KI06_MALDO; Uncharacterized protein
STRINGXP_009364234.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.12e-44Dof family protein