PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr001076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 234aa MW: 26492.9 Da PI: 11.0606 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.9 | 7.7e-12 | 131 | 175 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR RK++ +e+L++ v L eN++L ++l Pbr001076.1 131 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRELNNRL 175 5789**********************************9998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-13 | 127 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.3E-10 | 127 | 175 | No hit | No description |
PROSITE profile | PS50217 | 10.818 | 129 | 175 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.49E-10 | 131 | 178 | No hit | No description |
Pfam | PF00170 | 1.9E-9 | 131 | 175 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.69E-19 | 132 | 179 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 134 | 149 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MKHQRFVPSL SSSPLPSLSK LEVQRAFVVA TMLSTLPANL PSDSLLHLSA FDGGFTPGGF 60 TPWDCSDLFQ ATPSPEPVIS TLSSSPVQSP KTVISSSGSD DDPNRPDRSH ANAKSCQNDD 120 SNRTVSVVDE RKRRRMISNR ESARRSRMRK QKHLENLRNQ VNRLRVENRE LNNRLRIVLY 180 HSQCVRTDND RLRSDHVLLR RKLSDIRRIL VFSQLQHFSS AWPCNTIIPE QTP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 134 | RKRRR |
2 | 130 | 151 | RKRRRMISNRESARRSRMRKQK |
3 | 143 | 150 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr001076.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009362602.1 | 1e-145 | PREDICTED: bZIP transcription factor 11 | ||||
TrEMBL | M5WJW1 | 1e-103 | M5WJW1_PRUPE; Uncharacterized protein | ||||
STRING | XP_009362602.1 | 1e-145 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 8e-22 | basic leucine-zipper 6 |