PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr000384.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 292aa    MW: 31307.3 Da    PI: 9.3701
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr000384.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.75.4e-382887261
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 +++  +cprC+s+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrn+PvGgg+rk k++
  Pbr000384.1 28 NQQPHRCPRCQSMNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNIPVGGGCRKGKRA 87
                 678999**************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-202977IPR003851Zinc finger, Dof-type
PfamPF027014.3E-333086IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.5743286IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103470IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MQQQQQEGGE QKEQQNQDQR LKAAEQQNQQ PHRCPRCQSM NTKFCYYNNY SLSQPRYFCK  60
ACRRYWTQGG TLRNIPVGGG CRKGKRAKGG SSSASASRTV QPQPPQNEQD MQNNLGIGGG  120
SVGMSTANPS GGLAIHHQYY PGSSHGYLSP FAGLQSLSQS QPFNVGGGHD PASNMSLLQG  180
FNLSVPMVAL QPQQRQQFFQ MGGARSNNLL DQAAVYPSEH DQWAPQSVVN RSSVNTSSSA  240
AAASDSALWT MGNNNPITTT TTTTTASSSS GGPSLNPKQW PDLPGSYGSP N*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr000384.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009353076.10.0PREDICTED: dof zinc finger protein DOF1.1-like
TrEMBLA0A498IXK51e-111A0A498IXK5_MALDO; Uncharacterized protein
STRINGXP_009353076.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41453258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.16e-26TARGET OF MONOPTEROS 6