PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf04031g00008.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 308aa    MW: 35098.8 Da    PI: 6.7752
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf04031g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.93.3e-10172215148
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaia 48 
                               +++ GVr +k +gr+ +eI+ p    ++ kr+ lg+f+taeeA  a+  
  Peaxi162Scf04031g00008.1 172 THFVGVRKRK-SGRFSSEIKNP----ISkKRICLGTFDTAEEASHAYQS 215
                               5799***999.7******9997....246*****************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.46E-14172213No hitNo description
PROSITE profilePS5103212.918173219IPR001471AP2/ERF domain
SMARTSM003806.0E-7173241IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-11173218IPR016177DNA-binding domain
PfamPF008476.4E-5173214IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-15173216IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MDDDEGYIPN LSRINKNLFL CFPSPLSITK GRMHLERMDD DEGYIPNLSR INKNLFLCFP  60
SPLSMQDWAR ACTCPSDAAR SRALIQLKKS YVPSVISYGR TQSIPIVYHK VFLASEAYFS  120
KKSEFEKLSK ENNPKNCDQI QLVGASLSVD IDQTLNVDSL GRIKTIASHE TTHFVGVRKR  180
KSGRFSSEIK NPISKKRICL GTFDTAEEAS HAYQSKKLEN GFVPCRSSDV LHNYIMDSVA  240
RLRILGEDLV NRIVTLEDNF RTVWSLDVDN PDMPNPIGRE IFDLSTSIWV DFEEDAEQNK  300
RTYDVNIQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1J6JBA21e-27A0A1J6JBA2_NICAT; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA501437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-12ERF family protein