PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf03393g00015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 173aa MW: 20493.3 Da PI: 8.9047 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.9 | 4.3e-08 | 46 | 84 | 17 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 A+rsR RK+++i eLe+ v++L+ e ++ ele l+++ Peaxi162Scf03393g00015.1 46 AQRSRVRKLQYISELERNVQVLQVEGSEVSAELEFLNQQ 84 89******************************9999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14703 | 1.68E-13 | 44 | 85 | No hit | No description |
SuperFamily | SSF57959 | 6.83E-6 | 46 | 87 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-5 | 46 | 85 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MILVMKYTVP EQWWMSNPLF LNNGLSVPEQ WWMSNPLFLN SGLQFAQRSR VRKLQYISEL 60 ERNVQVLQVE GSEVSAELEF LNQQNLILSM ENKALKQRLE NLAQEQLIKY LEHEVLERER 120 GRLRSLYQQQ QFPQSQQKQQ SSSSHRRTTS RDLDQQFADL SLKQKEGSGQ LHM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT013319 | 5e-99 | BT013319.1 Lycopersicon esculentum clone 135006R, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009790491.1 | 1e-63 | PREDICTED: uncharacterized protein At4g06598-like isoform X1 | ||||
Refseq | XP_009790492.1 | 1e-63 | PREDICTED: uncharacterized protein At4g06598-like isoform X1 | ||||
Refseq | XP_016512674.1 | 1e-63 | PREDICTED: uncharacterized protein At4g06598-like | ||||
Swissprot | Q9M2K4 | 2e-21 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A1S4DHD5 | 2e-62 | A0A1S4DHD5_TOBAC; uncharacterized protein At4g06598-like | ||||
TrEMBL | A0A1U7XLK7 | 2e-62 | A0A1U7XLK7_NICSY; uncharacterized protein At4g06598-like isoform X1 | ||||
TrEMBL | M1CBU6 | 1e-63 | M1CBU6_SOLTU; Uncharacterized protein | ||||
STRING | XP_009790491.1 | 4e-63 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2765 | 17 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 2e-46 | bZIP family protein |
Publications ? help Back to Top | |||
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