PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf01414g00012.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 310aa MW: 34242.5 Da PI: 9.0133

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf01414g00012.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.1	1.7e-37	30	90	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ ++cprC+stntkfCyynnyslsqPr++Ck+CrryWtkGGalr vP+Ggg+rknkk + Peaxi162Scf01414g00012.1 30 QEQVINCPRCNSTNTKFCYYNNYSLSQPRHYCKSCRRYWTKGGALRSVPIGGGCRKNKKIN 90 67899*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-25	24	88	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.2E-33	32	88	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.873	34	88	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	36	72	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MTPDNKAEKS QSKEGDQSSS DRKTSTVRRQ EQVINCPRCN STNTKFCYYN NYSLSQPRHY 60 CKSCRRYWTK GGALRSVPIG GGCRKNKKIN SSSKDYSSAT SSSDIGGFNI FQGFSPAMDF 120 PKLNSSTTNS IFNKNSSFGG ISTSGSSPCF NLEHSAGSLM GFNLYLSKSL LKQVNDTGNL 180 ASSIESLSSI NQDLHWKLQQ QRLANMLFGG EDQKDSNVSS VPLGNIQKPQ PILFQNLENF 240 KPETAFGNNT SRKENSGSEN FATEWFFDNS FTSVNPTPTN SSNGNANENS NSWNDIQAWS 300 NLNQYSTVLP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021274371.1	1e-113	dof zinc finger protein DOF5.7-like
TrEMBL	A0A061DI28	1e-111	A0A061DI28_THECC; Dof-type zinc finger DNA-binding family protein
STRING	EOX91892	1e-112	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5242	22	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	9e-34	Dof family protein