PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01333g10014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 207aa    MW: 22635.5 Da    PI: 9.0584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01333g10014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-202575155
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++y+GVr ++ +gr++AeIrdp++   ++r++lg+f+tae+Aa+a++ a+++l+g
  Peaxi162Scf01333g10014.1 25 PRYRGVRKRP-WGRFAAEIRDPVK---KTRVWLGTFDTAEDAARAYDDAARALRG 75
                              68********.**********654...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-132575IPR001471AP2/ERF domain
CDDcd000181.70E-202585No hitNo description
PROSITE profilePS5103223.7752683IPR001471AP2/ERF domain
SMARTSM003802.8E-382689IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-332683IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-222684IPR016177DNA-binding domain
PRINTSPR003672.0E-112738IPR001471AP2/ERF domain
PRINTSPR003672.0E-114965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MRHRKSSELN RPRSDIPKQP ESDPPRYRGV RKRPWGRFAA EIRDPVKKTR VWLGTFDTAE  60
DAARAYDDAA RALRGSKAKT NFPVVPVTTT IQNTTGVSPG QFELFPRPAC SSMSSTLESS  120
SGPRGAGSGH HKVVGATRLK IPRPVLIPTQ DCRSDCDSSS SVVDDRCDVD QTSSLMQKQP  180
LPFDLNLPPP LSDDAAADDL HVTALCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-222784664ATERF1
3gcc_A1e-222784664ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2596010.0HQ259601.1 Petunia x hybrida ethylene-responsive-element-binding factor 7 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016501349.16e-85PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotQ9SXS83e-35ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLE3VVR61e-149E3VVR6_PETHY; Ethylene-responsive-element-binding factor 7
STRINGXP_009630856.11e-78(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137791113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.11e-21ethylene response factor 8