PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01210g00002.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 230aa    MW: 26399.9 Da    PI: 9.0418
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01210g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-131457144
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                              +g+W +eEd ll ++++++G g W+ ++ + g++R++k+c++rw
  Peaxi162Scf01210g00002.1 14 KGAWAEEEDILLRKCIEKYGEGKWHQVPVRAGLNRCRKSCRLRW 57
                              799***************************************** PP
2Myb_DNA-binding27.38.5e-0956802348
                              -HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                              +W++Ia +++ gRt++++k++w+++l
  Peaxi162Scf01210g00002.1 56 RWSLIAGRLP-GRTANDVKNYWNTHL 80
                              4*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.657965IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-141256IPR009057Homeodomain-like
SuperFamilySSF466891.32E-151376IPR009057Homeodomain-like
SMARTSM007173.3E-131382IPR001005SANT/Myb domain
PfamPF002494.7E-121457IPR001005SANT/Myb domain
CDDcd001672.95E-101680No hitNo description
Gene3DG3DSA:1.10.10.605.8E-115780IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MNTSVFTSSG VLRKGAWAEE EDILLRKCIE KYGEGKWHQV PVRAGLNRCR KSCRLRWSLI  60
AGRLPGRTAN DVKNYWNTHL LRRSNFASPP QQHERKCTKE IRTMAKNAII RPQPRNLSKL  120
AKNNVSNHST IHKDEYSKQK MFIEKPTMAE VVSRDNNVEW WTNLLLDNCN GFEKAAPESS  180
STFKNIESLL NEELLSASIN GGTNYPMQET GDMGWSDFCI DSDPWELLLQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1161690.0HQ116169.1 Petunia x hybrida cultivar Mitchell R2R3 MYB anthocyanin regulator (DPL) mRNA, complete cds.
GenBankHQ4281060.0HQ428106.1 Petunia x hybrida cultivar Mitchell DEEP PURPLE gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240653.12e-65PREDICTED: transcription factor MYB113-like
RefseqXP_019240654.12e-65PREDICTED: transcription factor MYB113-like
TrEMBLE9N6671e-160E9N667_PETHY; DEEP PURPLE
STRINGXP_009626596.14e-63(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56650.11e-40production of anthocyanin pigment 1