PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01012g00240.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 422aa    MW: 45184.2 Da    PI: 7.6577
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01012g00240.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.54.4e-21279341163
                               XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               e+e kre+rkq+NRe+ArrsR+RK+ae eeL+ +v++L+aeN +Lk+e+++l ++++klk e+
  Peaxi162Scf01012g00240.1 279 EREMKREKRKQSNRESARRSRLRKQAEAEELAIRVQSLTAENLTLKSEINKLMENSEKLKLEN 341
                               799*********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.5E-36192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.6E-26130259No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-16273338No hitNo description
PfamPF001709.1E-20279341IPR004827Basic-leucine zipper domain
SMARTSM003382.7E-18279343IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.679281344IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-9282338No hitNo description
CDDcd147022.47E-19284332No hitNo description
PROSITE patternPS000360286301IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGNSEDGKSS KPEKSSSPAP DQSNLHLYPD WAAMQAYYGP RVAVPAYFNS AVAPGHTPHP  60
YMWGPQPMIP PYGAPYAAIY AHGGVYAHPG VPIGSHPPGQ GMTTSPAVSQ AMDGASLSLD  120
TSAKSSGNSD RGLTTKLKEF EGLSMSLGNG CADNVEGGTD HGHSQSEETE GSTDGSDTNA  180
AGVCERSKKR SRETTPNDSA DCKSHSRRCQ PTGKGNDDSE KAIVAVSPGK VAKKVMGTVL  240
SPGMTTLEMR NPVSHVKTSP TNVSQLSPTL PNESWIQNER EMKREKRKQS NRESARRSRL  300
RKQAEAEELA IRVQSLTAEN LTLKSEINKL MENSEKLKLE NAALVERMKN GELGKREEVS  360
LGKIDDKRLQ PIGTADLLAR VNNSGSLDTT NEDGEVYVKN SSGAKLRQLL DSSPRTDAVA  420
AG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295301RRSRLRK
2295302RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTrans-activator of a beta-glucuronidase (GUS) reporter gene. Binds to a G-box-related element, (5'-GCAACGTGGC-3'). Also binds to the HEX-motif of wheat histone H3 promoter.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016538167.10.0PREDICTED: transcriptional activator TAF-1
SwissprotQ991421e-155TAF1_TOBAC; Transcriptional activator TAF-1 (Fragment)
TrEMBLA0A1U8DT230.0A0A1U8DT23_CAPAN; Common plant regulatory factor 1
TrEMBLA0A2G2YY320.0A0A2G2YY32_CAPAN; transcriptional activator TAF-1
STRINGXP_009765847.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-102G-box binding factor 3
Publications ? help Back to Top
  1. Oeda K,Salinas J,Chua NH
    A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes.
    EMBO J., 1991. 10(7): p. 1793-802
    [PMID:2050116]