PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00993g00011.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 259aa    MW: 27667.9 Da    PI: 8.4996
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00993g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.11.9e-382281362
                    zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                               ++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+s
  Peaxi162Scf00993g00011.1 22 PEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKRS 81
                              57899***************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-291879IPR003851Zinc finger, Dof-type
PfamPF027013.0E-332479IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.1612579IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102763IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009751Biological Processresponse to salicylic acid
GO:0042545Biological Processcell wall modification
GO:0045787Biological Processpositive regulation of cell cycle
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MPTEVSEKRV TKLQSGAPAP EPEHLPCPRC DSTNTKFCYY NNYNFSQPRH FCKSCRRYWT  60
HGGTLRDIPI GGGSRKNAKR SRMITPTNST TSSNTTSCLS STLSPREYHH APNVSPVSPF  120
LVPLTSDHHG GFVPFGSSDM KPSFTSLLST QGPHGLLALG GFGLGVGTVE DLGFGLGRPI  180
WPFPGVLSNG NVDNNNSTNG PGANVLGSTW NLANGEGGGF VGGGDCFNFP DLAISTHGNG  240
IFWSVVLEFR TAVHRSVVI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00402DAPTransfer from AT3G50410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016439350.11e-113PREDICTED: dof zinc finger protein DOF3.4-like
TrEMBLA0A1S3XHA81e-112A0A1S3XHA8_TOBAC; dof zinc finger protein DOF3.4-like
STRINGXP_009591716.11e-111(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45322241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.17e-40OBF binding protein 1