PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00954g00114.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 389aa MW: 44514.9 Da PI: 9.3431

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00954g00114.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.3	3.4e-25	55	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 Y++YA++ GFsvr+ + +ks+++++i+ ++fvCske +r++++ + ++r+r +tr gCk l v+k+k+g+w+v +l++eHn Peaxi162Scf00954g00114.1 55 IYHDYAHRNGFSVRRGRITKSRKDKSIIGQEFVCSKERFRRKKNLE---SNRPRDVTREGCKVLLYVSKKKEGNWVVCRLVSEHN 136 7*************************************998777...999***************************** PP FAR1 87 Hela 90 Hela Peaxi162Scf00954g00114.1 137 HELA 140 97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-22	55	140	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence Send to blast
MENSNLDEQN IKGVEVRLEE SNMDGPEQAP YVGVENSREP YIGMDFQSLD DSFKIYHDYA 60 HRNGFSVRRG RITKSRKDKS IIGQEFVCSK ERFRRKKNLE SNRPRDVTRE GCKVLLYVSK 120 KKEGNWVVCR LVSEHNHELA SPNSQKFLRS KRKKSEAQKS LIDLLDSSGV RPSIIASVLI 180 NQAGGVDQLN LTDRWTRNAT EEKIDEHQNE TNILKPSVSW FNNIMMHSIG LPNELQGLKN 240 ITCLHIKELD ELPYEYEKDC VSGDQVSAPN IESNSFEHSQ NFTLLDPPRA INKGRPRSLR 300 MKGSLESTRK TKKDSSLKQK GQSRSTKLKN KETRLNSNAE AEQRSTVTSV NEARAMSQQY 360 AESYQGYVEN TGYTYPSSFM HHNNGMNKC

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence Send to blast

MENSNLDEQN IKGVEVRLEE SNMDGPEQAP YVGVENSREP YIGMDFQSLD DSFKIYHDYA  60
HRNGFSVRRG RITKSRKDKS IIGQEFVCSK ERFRRKKNLE SNRPRDVTRE GCKVLLYVSK  120
KKEGNWVVCR LVSEHNHELA SPNSQKFLRS KRKKSEAQKS LIDLLDSSGV RPSIIASVLI  180
NQAGGVDQLN LTDRWTRNAT EEKIDEHQNE TNILKPSVSW FNNIMMHSIG LPNELQGLKN  240
ITCLHIKELD ELPYEYEKDC VSGDQVSAPN IESNSFEHSQ NFTLLDPPRA INKGRPRSLR  300
MKGSLESTRK TKKDSSLKQK GQSRSTKLKN KETRLNSNAE AEQRSTVTSV NEARAMSQQY  360
AESYQGYVEN TGYTYPSSFM HHNNGMNKC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015167012.1	1e-95	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A3Q7EE03	4e-79	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-32	FAR1-related sequence 5