PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00951g00332.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 285aa    MW: 32622.5 Da    PI: 6.5166
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00951g00332.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.4e-082368346
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                               WT+eE + +  a++ +  +   +W ++a++++ g++  ++ + +  
  Peaxi162Scf00951g00332.1 23 EWTKEENKMFESAIAIYDENtpnRWFKVAAMIP-GKSVLDVMNQYKE 68
                              7******************9*************.*******999975 PP
2Myb_DNA-binding44.34.1e-14120164347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE+ +++ + +++G+g+W+ I+r++   Rt+ q+ s+ qky
  Peaxi162Scf00951g00332.1 120 PWTEEEHRRFLMGLEKYGKGDWRNISRKLVISRTPTQVASHAQKY 164
                               8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-41770IPR009057Homeodomain-like
PROSITE profilePS512938.3211973IPR017884SANT domain
SMARTSM007171.7E-112072IPR001005SANT/Myb domain
SuperFamilySSF466891.44E-122277IPR009057Homeodomain-like
CDDcd001671.16E-82370No hitNo description
PfamPF002491.5E-62368IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-12111168IPR009057Homeodomain-like
PROSITE profilePS5129420.966113169IPR017930Myb domain
SuperFamilySSF466894.16E-16114169IPR009057Homeodomain-like
TIGRFAMsTIGR015573.7E-17116168IPR006447Myb domain, plants
SMARTSM007171.5E-12117167IPR001005SANT/Myb domain
CDDcd001672.87E-10120164No hitNo description
PfamPF002493.4E-12120164IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGTLFPTFVS NSSWMLQQSK SREWTKEENK MFESAIAIYD ENTPNRWFKV AAMIPGKSVL  60
DVMNQYKELV SDVCDIEAGL VPSPDYFTSS VTLELIDDCG LQTFRKRSKS SDQERKKGVP  120
WTEEEHRRFL MGLEKYGKGD WRNISRKLVI SRTPTQVASH AQKYYQRQQL SGGKDKRRPS  180
IHDITTVRFT ADTSEDNMYN IKSVSKENSC TTSSFEKFTT ITDVVNCWGN SSDDDLMPFG  240
STFGGQTFMA HPCEIVSQYQ DGYGTDIINC NSQLQIQSTR YQIWG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A7e-141889576RADIALIS
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104116RKRSKSSDQERKK
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016564871.11e-148PREDICTED: transcription factor DIVARICATA-like isoform X1
SwissprotQ8S9H79e-78DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2G3CUD01e-147A0A2G3CUD0_CAPCH; Transcription factor MYB1R1
STRINGXP_009627320.11e-147(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.22e-79MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]