PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00939g00234.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GRAS
Protein Properties Length: 264aa    MW: 29852.7 Da    PI: 6.9412
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00939g00234.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS60.92.6e-1996190157252
                      GRAS 157 eleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp..gEalaVnlvlqlhrlld.esvsleserdevLklvkslsPkv 238
                                l e+g++L +fA++++++f+f+ +va++l+d++ + L+++p   Ea aVn++++  ++l+ e++++e    ++L+ +k+++Pk+
  Peaxi162Scf00939g00234.1  96 VLAEIGRKLPEFARKIDLEFQFHGVVANSLADVDASILNIRPdnVEASAVNSIFEPNHVLSaEPGAIE----KLLNSIKEMQPKI 176
                               6899*************************************9889**********9888741444444....6************ PP

                      GRAS 239 vvvveqeadhnses 252
                               ++++e+e ++ ++ 
  Peaxi162Scf00939g00234.1 177 LTIIEKEPNYYGSV 190
                               *******9984444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS509859.9471264IPR005202Transcription factor GRAS
PfamPF035149.0E-1796190IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MTACLEAVKQ NNLNNLAIAL ARDLRTLAVQ QSRKMWLLIL HNLWIKRFVE RIHDIIIHGM  60
TLGLTSYSLT SLPIKPFLIR VHVRNGQHLC WLSLWVLAEI GRKLPEFARK IDLEFQFHGV  120
VANSLADVDA SILNIRPDNV EASAVNSIFE PNHVLSAEPG AIEKLLNSIK EMQPKILTII  180
EKEPNYYGSV SMSKFESQDN SKSTQPMVEC ETLIQLGPYA CRQASIVLAT FKSWDIYSVE  240
EHDECLMLRR IIYSSPSLLG GQDG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.11e-29GRAS family protein