PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00876g00220.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 274aa    MW: 31301.6 Da    PI: 5.6337
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00876g00220.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.69e-08151195655
                               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +++ r RR++i ++ +eL +l+P       +K++ ae+ + A +YIk Lq
  Peaxi162Scf00876g00220.1 151 SIAARLRRKKITEKTQELGKLIPGG-----QKMNTAEMFQAAYKYIKFLQ 195
                               67789******************86.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.37E-8143197No hitNo description
PROSITE profilePS5088812.601145194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-11147203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-10148198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-8151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-5151195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MDSLIYYSNS HLEPIHELNS EITILPSNQL LLSNFKDESF TIQEDSCILE PQYDSNDLFL  60
PGINTYNQEY NFQSFPKRQK FIQENYYPEV VTNSNFCNEF IPNPPILQDL SSFSMPEFPI  120
SPQVYNRGEN GVGTKVTHVK KCNEKNLSAQ SIAARLRRKK ITEKTQELGK LIPGGQKMNT  180
AEMFQAAYKY IKFLQAQAGI LEVMGSYQEK GESFQTPELI HNLVGSPLIQ EKLYSSEKCI  240
VPKMLVESLA NDHEFQHSNH CVMKEANKLI MPGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015084372.19e-65transcription factor bHLH52-like
RefseqXP_016541148.13e-64PREDICTED: transcription factor bHLH53-like
TrEMBLA0A2G3DDP61e-63A0A2G3DDP6_CAPCH; Transcription factor bHLH87
STRINGPGSC0003DMT4000536511e-62(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.15e-32bHLH family protein