PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00859g00037.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 423aa MW: 47632.6 Da PI: 4.7451

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00859g00037.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.4	1.9e-06	311	349	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L++A+eYIk L Peaxi162Scf00859g00037.1 311 VRKEKMGDRITALQQLVSPF-----GKTDTASVLQEAIEYIKFL 349 5778999********998.....8**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.678	300	349	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.00E-7	310	353	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.8E-9	310	358	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.76E-12	310	362	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0015	311	355	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence Send to blast
MAEEFQAGVC GESWWNYSTS FGNSSVCASS IHDPIGHDFA WPISDLLDMK DKSSDESCSD 60 DSMVLQELPK HDHLLDSFRS TPVNLSMDYS TLQMWEIGLS STSSTPDWNQ SPVSHDKLDS 120 NYPSMLQEDN TNSRLNYRQE KGLIPELKRN FSSISEDSSS NSFKPINQDF ALGLQPFNPV 180 TISSTTESTV TCQRQNSSFA YSSDLLQTLF DTDPQQPQQS LFDNNKPINY ASSTNYRQNL 240 NNFAPSLPRY PDLLKSSLLK QTPSNHITSS KSNIEDIQES TTNSLTENRS NEPSYKRPRI 300 ETPSALPTFK VRKEKMGDRI TALQQLVSPF GKTDTASVLQ EAIEYIKFLH DQVNVLSTPY 360 VKNGSPTQRQ QVKEQGLKQE LRRRGLCLVP MSSTFPAVAE TMDFWTPALG GYSDSETTQR 420 RED

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence Send to blast

MAEEFQAGVC GESWWNYSTS FGNSSVCASS IHDPIGHDFA WPISDLLDMK DKSSDESCSD  60
DSMVLQELPK HDHLLDSFRS TPVNLSMDYS TLQMWEIGLS STSSTPDWNQ SPVSHDKLDS  120
NYPSMLQEDN TNSRLNYRQE KGLIPELKRN FSSISEDSSS NSFKPINQDF ALGLQPFNPV  180
TISSTTESTV TCQRQNSSFA YSSDLLQTLF DTDPQQPQQS LFDNNKPINY ASSTNYRQNL  240
NNFAPSLPRY PDLLKSSLLK QTPSNHITSS KSNIEDIQES TTNSLTENRS NEPSYKRPRI  300
ETPSALPTFK VRKEKMGDRI TALQQLVSPF GKTDTASVLQ EAIEYIKFLH DQVNVLSTPY  360
VKNGSPTQRQ QVKEQGLKQE LRRRGLCLVP MSSTFPAVAE TMDFWTPALG GYSDSETTQR  420
RED

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016437700.1	1e-148	PREDICTED: transcription factor bHLH112-like
TrEMBL	A0A1S3XCN8	1e-146	A0A1S3XCN8_TOBAC; transcription factor bHLH112-like
STRING	XP_009617305.1	1e-147	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA860	24	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	3e-51	bHLH family protein