PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00832g00315.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 313aa    MW: 34167.7 Da    PI: 9.6237
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00832g00315.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.41.5e-3870129362
                    zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                               e+ lkcprC+stntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+s
  Peaxi162Scf00832g00315.1  70 EAGLKCPRCNSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGALRNVPVGGGCRRNNKRS 129
                               6779***************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-3453122IPR003851Zinc finger, Dof-type
PfamPF027013.1E-3272127IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.82373127IPR003851Zinc finger, Dof-type
PROSITE patternPS01361075111IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAFSSFPVYL DHPNLHQLQQ PDHQQGNPGL ENSQLQAPTP PTAQVGGGLG SIRPGSMVDR  60
ARMQKIPLPE AGLKCPRCNS TNTKFCYYNN YNLSQPRHFC KSCRRYWTRG GALRNVPVGG  120
GCRRNNKRSK SSINNNNNNN STSKAAGGVQ LLGNSINTST SASPTRCTME NITNAHQFSQ  180
PSTQFTPLMA AFQNFNNYGG FQTPHQVVHA TSNSNGGLSE MGFHNSNNLL PSLAANFEHT  240
TNLYPFQGDQ GTTIEASNGV NSQVKMEDNR QGMNLNSTKQ FLGTLENNQY WSGANSWTGF  300
SGLNNSSTTS HLL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019235411.11e-127PREDICTED: dof zinc finger protein DOF2.4-like
TrEMBLA0A2G2VP281e-126A0A2G2VP28_CAPBA; Dof zinc finger protein DOF2.4
STRINGXP_009774236.11e-117(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.16e-44OBF-binding protein 3