PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00818g00530.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 302aa    MW: 33899.1 Da    PI: 5.4561
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00818g00530.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.4e-14121168355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h  +Er+RR+r  + f+ L + +P +     kKl+Ka+iLe A++YI +Lq
  Peaxi162Scf00818g00530.1 121 QDHLLAERKRRERFTQLFAALAKSIPDL-----KKLDKASILEDAIKYIEQLQ 168
                               668899**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.053118167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-12121168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-15122179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.28E-12123172No hitNo description
SuperFamilySSF474592.36E-15123180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-13124173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MENTSFNNLE NNRGREAPFE FKNLLSEMFS SFSNQNPSRS PLEQGNTIVK EASKAAFPSS  60
PPSTPNPSSS HNMISFGNPA ESNFLGDEQD YDMMSVENVM TLSSSSTSMA KRICRSPLQS  120
QDHLLAERKR RERFTQLFAA LAKSIPDLKK LDKASILEDA IKYIEQLQER IRDLEEGTKQ  180
NLNIESTVTL KQPLTATSDD NTSLTKNIDE SKPENEIKVQ FVDKNVLIGI HCSKTRRSIL  240
SIITGTMEKL RLTIHNIRVT PCNHTALNIS IFSEVDQHVD ISVQDVEKAF ELAFLSTPNM  300
AD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126131ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019249041.11e-120PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1J6IQ151e-119A0A1J6IQ15_NICAT; Transcription factor bhlh18
STRINGXP_009623662.11e-119(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125981122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-31bHLH family protein