PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00789g00013.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Nin-like
Protein Properties Length: 270aa    MW: 30032.7 Da    PI: 9.9234
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00789g00013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK60.62.9e-192468650
                    RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                              s+e++sk F+l++ dAA +Lgvc++vLK+iC ++G+ RWP+Rk+ 
  Peaxi162Scf00789g00013.1 24 SFEQVSKLFNLSLSDAAESLGVCTSVLKKICYENGLVRWPYRKVI 68
                              799****************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151914.083390IPR003035RWP-RK domain
PfamPF020428.1E-182567IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MQGSGPISNP IQNPTPNPDP KSPSFEQVSK LFNLSLSDAA ESLGVCTSVL KKICYENGLV  60
RWPYRKVISG KSIEDIKKEA LREKQERSME FPKAAGEKGY PLQNKSTIST MEMPKAGAFS  120
QQQGTKSAQS GTLPHFRISN LPKGTSDSYD EFKYGFPSDG LSTVTNRWWG NKSPDGSEDS  180
QLNDDNDKNS KEEAENRAEK TKRKSSVDSI GTSLLTDLRK RAVKEGKATL RLGVYRGHRA  240
NMLDSTKRKI LLQVFKSYFH VHGDTSNFES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600090.11e-161PREDICTED: uncharacterized protein LOC104095632
TrEMBLA0A1S4A4S31e-159A0A1S4A4S3_TOBAC; uncharacterized protein LOC107793702
STRINGXP_009600090.11e-160(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107441921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-09RWP-RK domain-containing protein