PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00772g00048.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 248aa    MW: 27789.1 Da    PI: 10.1952
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00772g00048.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.3e-1369121154
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++ +hn+ Er RR+++N  ++ Lr+llP+a  +++kKls  +++  + eYI +L
  Peaxi162Scf00772g00048.1  69 KKLKHNASERSRRKKMNFLYSSLRSLLPSA-TQKKKKLSFPATVSFVQEYIPEL 121
                               5789*************************7.477777**************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.58668121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.0E-1169135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-1069121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.98E-869126No hitNo description
SuperFamilySSF474591.31E-1269137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-674127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MVALCSSGFV PTTGGWSFEV LSDEQNKLII QNENTDLFKG LHVDNNSSPP SHKQSKGVSD  60
FGEESLMAKK LKHNASERSR RKKMNFLYSS LRSLLPSATQ KKKKLSFPAT VSFVQEYIPE  120
LKKEIERLSQ TKNLLLSTVS KKGDLIQHKN QRHTMKGTSS TSITASPLCH EQVLIQISTT  180
QANGFPISEA LKKLEEDGLL LLNASSFKSF GDKIFHSLHL QMQGPAIMEL QILKTKLLLM  240
YEKNLNLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600422.12e-96PREDICTED: transcription factor ORG2-like
TrEMBLA0A314L3U54e-86A0A314L3U5_NICAT; Transcription factor org3
STRINGXP_009600422.19e-96(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-34bHLH family protein