PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00714g00029.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 628aa    MW: 70102.8 Da    PI: 7.4565
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00714g00029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.75.7e-1869112448
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               WT+eEd ll ++vk++ g++Wk+Ia++m  gRt+ qc +rwqk+l
  Peaxi162Scf00714g00029.1  69 WTEEEDYLLSEVVKRYNGRNWKKIAECMS-GRTDVQCLHRWQKVL 112
                               *****************************.************986 PP
2Myb_DNA-binding60.14.8e-19118164148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                               +g+WT+eEd+ +v++v+++G + W++Ia+ ++ gR +kqc++rw+++l
  Peaxi162Scf00714g00029.1 118 KGPWTKEEDDVIVELVEKYGCKKWSLIAKSLP-GRIGKQCRERWHNHL 164
                               79******************************.*************97 PP
3Myb_DNA-binding52.21.4e-16170212145
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                               r++WT++E+  l+++++ +G++ W+ Iar ++ gRt++ +k++w+
  Peaxi162Scf00714g00029.1 170 RDAWTEQEESVLLHYHQIYGNK-WADIARFLP-GRTDNAIKNHWN 212
                               789*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.74259112IPR017930Myb domain
SMARTSM007179.2E-1465114IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-2368128IPR009057Homeodomain-like
SuperFamilySSF466896.96E-1668122IPR009057Homeodomain-like
PfamPF002493.0E-1569112IPR001005SANT/Myb domain
CDDcd001678.54E-1469112No hitNo description
PROSITE profilePS5129431.296113168IPR017930Myb domain
SuperFamilySSF466892.13E-32115211IPR009057Homeodomain-like
SMARTSM007171.0E-16117166IPR001005SANT/Myb domain
PfamPF002497.8E-18118164IPR001005SANT/Myb domain
CDDcd001673.91E-16120164No hitNo description
Gene3DG3DSA:1.10.10.605.1E-28129171IPR009057Homeodomain-like
SMARTSM007171.2E-14169217IPR001005SANT/Myb domain
PROSITE profilePS5129420.527169219IPR017930Myb domain
PfamPF002492.3E-14170213IPR001005SANT/Myb domain
CDDcd001671.24E-11172212No hitNo description
Gene3DG3DSA:1.10.10.606.7E-22172219IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MNQVLLRIYF GYKIMIQVKE EVQTLDFCGF ASCSSFSDSS YEASTSRYSS EPGCRRSSGP  60
TKRSSQAGWT EEEDYLLSEV VKRYNGRNWK KIAECMSGRT DVQCLHRWQK VLNPELVKGP  120
WTKEEDDVIV ELVEKYGCKK WSLIAKSLPG RIGKQCRERW HNHLDPTIKR DAWTEQEESV  180
LLHYHQIYGN KWADIARFLP GRTDNAIKNH WNSSAKKRLS LNIQSEGSPN FSSHEKKLEI  240
GKYSLQAQSV EQTIFSGEQK GVDNAADACS TDLTIGCTYS AQNALRKDTS LFGACKSSEE  300
NVRDLIKPLG GIQFGKAEII PIGETDKPCH SNLNHTKILY PLSTSSLEFP LDRSHITSLS  360
SSQVEAVHPA SFGRMYETPK RSRHDVNNPD QDFLSLSLPG FTEVHSQGSK RNKSFDMQSS  420
LDLNQHGCLY YEPPQVKDLM IPLTDENLSS DNIIGADHGP PFCSTPPSLE LTVSGNGSSS  480
PESMLRNSAM SYTKTPSIIR KKTSKFSEAV RHSNCTGTTT PMYSFLGDPD RGDSSNLKDR  540
ISGCKTSVSG KSLGRRLEYA FDMEWDASRC RTPVSAAPPC GLNLGAIGAN TIQIIRIDGS  600
IRDFFDSCQF EATKISEAMT MLRLSSLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C6e-67692199159MYB PROTO-ONCOGENE PROTEIN
1h89_C6e-67692199159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1376381ETPKRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009761862.10.0PREDICTED: myb-related protein B-like
RefseqXP_009761863.10.0PREDICTED: myb-related protein B-like
RefseqXP_009761864.10.0PREDICTED: myb-related protein B-like
TrEMBLA0A1U7V6420.0A0A1U7V642_NICSY; myb-related protein B-like
STRINGXP_009761862.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103932025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.23e-83myb domain protein 3r-5