PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00711g00212.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Nin-like

Protein Properties

Length: 932aa MW: 103789 Da PI: 5.9713

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00711g00212.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.7e-29	610	661	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ Peaxi162Scf00711g00212.1 610 AEKTITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIQRWPSRKIKKV 661 589***********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.314	598	681	IPR003035	RWP-RK domain
Pfam	PF02042	1.9E-25	613	661	IPR003035	RWP-RK domain
SuperFamily	SSF54277	3.43E-22	825	914	No hit	No description
SMART	SM00666	1.2E-22	831	914	IPR000270	PB1 domain
PROSITE profile	PS51745	24.201	831	915	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	5.1E-21	832	910	No hit	No description
CDD	cd06407	1.60E-38	833	914	No hit	No description
Pfam	PF00564	1.4E-17	833	912	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence Send to blast
MDESVIPSNP LLPAPSDYLM DLDYMDELLL EGCWLETTDG NEFLQHSSST FSAPFDSSFM 60 WPTAIDANNV GFSEILSKDG QQEKQRSSFT ENLSISHCQG LNSAKVQAFG ENINNTMCTS 120 GQSENHLVEA PELNRRWWIG PKASSSVMDR LIWALGCIRD SSRDKGILLQ LWVPINRDGR 180 RLLTTNDQPF LLDLNCSRLA NYREVSVNYQ FPANEDSKEI VGLPGRVFAD KVPEWTPDVR 240 FFRREEYPRV GHAQECDVRG TLAVPVFEQG SRNCLGVIEV VMTTQKIKYR PELESVCKAL 300 EAVDLRTSEV SSTQDAKVCD LSYQAALHEI LEVLKSACET HGLPLAQTWV PCIQQGKGGC 360 RHSEENLIHC VSTEDSACYI ADPHVQGFHE ACSEYHLLRG QGVVGRAFMT NQPCFSADLT 420 SYSKTEYPLS HHAKMFGLHA AVAIRLRSIE TGSSDFILEF FLPSDCINPD GHKRMLTSLS 480 IIIQNVCRTL RVVTDKELQE ETVSIGDVAN PSVIISSKEV RIHHKEHSET SQERTSWTSC 540 DVEFQESSAV ISAFKDEKPV EKLRTESVEF RHHNDSGSGI GFASNGDHNA SAEGVSRNPG 600 KGGDRRRTKA EKTITLQILQ QYFAGSLKDA AKSIGVCPTT LKRICRQHGI QRWPSRKIKK 660 VGHSLQKIQR VIDSVQGASG TLQIESFYSN FPELASPNVS KLSPFADSKS DEHPKALNTQ 720 QEGCFTSPHV AASKTTSSSG SQSSTSSQCC SSGTKPQSYP LNVAGKEDPM VQEESVDNAV 780 KRVKSEPELH LSSEALKTMP RSQSHAYFAE NPVSEGLLHM KDGPSKSQED APRVKVTHGE 840 EKIRFRMQNS WRYNELLREI TRRFGIDDPS GLHLKYLDDD SEWVLLTCDA DLEECLDICM 900 SSENQMIKLI LVRDSQHHLG SSFGSCSPLL VQ

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence Send to blast

MDESVIPSNP LLPAPSDYLM DLDYMDELLL EGCWLETTDG NEFLQHSSST FSAPFDSSFM  60
WPTAIDANNV GFSEILSKDG QQEKQRSSFT ENLSISHCQG LNSAKVQAFG ENINNTMCTS  120
GQSENHLVEA PELNRRWWIG PKASSSVMDR LIWALGCIRD SSRDKGILLQ LWVPINRDGR  180
RLLTTNDQPF LLDLNCSRLA NYREVSVNYQ FPANEDSKEI VGLPGRVFAD KVPEWTPDVR  240
FFRREEYPRV GHAQECDVRG TLAVPVFEQG SRNCLGVIEV VMTTQKIKYR PELESVCKAL  300
EAVDLRTSEV SSTQDAKVCD LSYQAALHEI LEVLKSACET HGLPLAQTWV PCIQQGKGGC  360
RHSEENLIHC VSTEDSACYI ADPHVQGFHE ACSEYHLLRG QGVVGRAFMT NQPCFSADLT  420
SYSKTEYPLS HHAKMFGLHA AVAIRLRSIE TGSSDFILEF FLPSDCINPD GHKRMLTSLS  480
IIIQNVCRTL RVVTDKELQE ETVSIGDVAN PSVIISSKEV RIHHKEHSET SQERTSWTSC  540
DVEFQESSAV ISAFKDEKPV EKLRTESVEF RHHNDSGSGI GFASNGDHNA SAEGVSRNPG  600
KGGDRRRTKA EKTITLQILQ QYFAGSLKDA AKSIGVCPTT LKRICRQHGI QRWPSRKIKK  660
VGHSLQKIQR VIDSVQGASG TLQIESFYSN FPELASPNVS KLSPFADSKS DEHPKALNTQ  720
QEGCFTSPHV AASKTTSSSG SQSSTSSQCC SSGTKPQSYP LNVAGKEDPM VQEESVDNAV  780
KRVKSEPELH LSSEALKTMP RSQSHAYFAE NPVSEGLLHM KDGPSKSQED APRVKVTHGE  840
EKIRFRMQNS WRYNELLREI TRRFGIDDPS GLHLKYLDDD SEWVLLTCDA DLEECLDICM  900
SSENQMIKLI LVRDSQHHLG SSFGSCSPLL VQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00154	DAP	Transfer from AT1G20640	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975443	0.0	HG975443.1 Solanum pennellii chromosome ch04, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009622679.1	0.0	PREDICTED: protein NLP5-like
Refseq	XP_009622680.1	0.0	PREDICTED: protein NLP5-like
Swissprot	Q9LE38	0.0	NLP4_ARATH; Protein NLP4
TrEMBL	A0A1S4CYQ5	0.0	A0A1S4CYQ5_TOBAC; protein NLP5-like
STRING	XP_009622679.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein