PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00679g00310.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 318aa MW: 34353.9 Da PI: 9.0894

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00679g00310.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.2	1.8e-38	69	128	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+ lkcprCdstntkfCy+nny+lsqPr+fCk+CrryWt+GGalr vPvGgg+r+nkks+ Peaxi162Scf00679g00310.1 69 EAGLKCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKSK 128 6779*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-37	52	121	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.7E-32	71	126	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.506	72	126	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	74	110	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MVFSSFPVYL DHPNLQQLQQ PDHQQGNTGV ENPQLSSLPP PMQVGASPGS IRPGSMVDRA 60 RLAKIPLPEA GLKCPRCDST NTKFCYFNNY NLSQPRHFCK TCRRYWTRGG ALRSVPVGGG 120 CRRNKKSKSS SNNSKTAGGN STERQIGTTS TSTSVRSPSS CSTDITGHHF SQSSTQLTPL 180 MAAFQNLNHH YGGFQPPPLV STHNNNGGLG EMGFQIGSNN STNNLQASGG SDHHQWRLPS 240 LAAGSFEPTT NLHPFQVEGI EASSSGISHD AVRMEESNNQ GLNSTKQFLG TMENNQYWGG 300 NAWTGFSGLN SSSTNHLL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009774236.1	1e-173	PREDICTED: dof zinc finger protein DOF2.4-like
Refseq	XP_009774300.1	1e-173	PREDICTED: dof zinc finger protein DOF2.4-like
Refseq	XP_009774363.1	1e-173	PREDICTED: dof zinc finger protein DOF2.4-like
Refseq	XP_009774425.1	1e-173	PREDICTED: dof zinc finger protein DOF2.4-like
TrEMBL	A0A1U7WAH6	1e-172	A0A1U7WAH6_NICSY; dof zinc finger protein DOF2.4-like
STRING	XP_009774236.1	1e-172	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	4e-45	OBF-binding protein 3