PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00665g00022.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 301aa    MW: 33284.7 Da    PI: 4.6133
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00665g00022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-1770119255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Peaxi162Scf00665g00022.1  70 TYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAALSIKG 119
                               599***998.**********854...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.94470128IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-2970129IPR001471AP2/ERF domain
PfamPF008471.9E-1170119IPR001471AP2/ERF domain
SMARTSM003804.4E-3270134IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-1870128IPR016177DNA-binding domain
CDDcd000181.66E-2971128No hitNo description
PRINTSPR003671.3E-87182IPR001471AP2/ERF domain
PRINTSPR003671.3E-893109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MADPTNSETD QSSSYNSYSP SSTNSSSSCI LENNTINSKN RSKRCREQQE EEEDDVTKNS  60
KKKSDGKHPT YVGVRMRAWG KWVSEIREPK KKSRIWLGTF ATPEMAARAH DVAALSIKGK  120
KSAILNFPQF AHLLPRPVTC SPRDVQAAAV KAAHMDHLNP NSDIDSSESV PAGSITSSSS  180
SLSLVSSITS PCDEESTPPE EAAEILPAAV ALPQQEELSE IVELPRLDTC YESTQEVLRF  240
IESDGWDYYG HPVPWLQQHT TTSLGSDCEY FGGESNNYMT FTTELESTMV STSFESLLWQ  300
L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-15681291273Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009620060.11e-101PREDICTED: ethylene-responsive transcription factor TINY-like
TrEMBLA0A1J6JYG63e-97A0A1J6JYG6_NICAT; Dehydration-responsive element-binding protein 3
STRINGXP_009620060.11e-100(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-48ERF family protein