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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peaxi162Scf00650g00223.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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| Family |
GRAS |
| Protein Properties |
Length: 464aa MW: 51766.4 Da PI: 5.1986 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00650g00223.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 337.4 | 2.6e-103 | 88 | 458 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklf 84
lv+lL+++Aea+++ + ela+ +L rl+elasp+g ++m+Rlaa+ft AL+a l + +k s+++++n+ ++laa++l+
Peaxi162Scf00650g00223.1 88 LVHLLMAAAEALNK-SRELARVILVRLKELASPNGtTNMERLAAHFTDALQALLDG-----AKNNMFSKDEQQNQGDVLAAFQLL 166
689*******9987.789*****************889******************.....555556677778899********* PP
GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..skeeleetgerL 165
+++sP++kf+h+taNqaIleav +++r+Hi+D+di++G+QW++L+qaL sR+ ++ p+lRiT++++ +g s +++etg+rL
Peaxi162Scf00650g00223.1 167 QDMSPFVKFGHFTANQAILEAVLHDRRIHIVDYDIMEGIQWASLMQALVSRKdgAPNPHLRITALSRCGNGrrSFGTVQETGRRL 251
****************************************************655677*********988898999********* PP
GRAS 166 akfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.n 249
+ fA+++g pf+f+ ++ e++++++L++ +gEal++n++l+l ++ + ++ + ++L k+l+P+++++ve+e++ +
Peaxi162Scf00650g00223.1 252 TAFAASIGQPFSFHHCRLDTDETFKPSTLKLVRGEALVINCMLHLPHFSYR---ASDSIASFLTGCKTLNPRLLTLVEEELKPiG 333
***************9999***************************99843...3334569*******************9999* PP
GRAS 250 sesFlerflealeyysalfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
+e F+ rf+++l++ysal+dslea++p +s ++r+ +Er++lg++i +a + r e+++ +W e+l + GF++ +s
Peaxi162Scf00650g00223.1 334 DEGFVGRFMDTLHHYSALYDSLEAGFPLQStsRARALIERVFLGPRIIGSLARVYRTRGEDER--CSWGEWLADGGFRQSDISFA 416
*************************99777669************************988887..89****************** PP
GRAS 333 aakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
+ +qaklll ++ dgyrvee ++ lvlgWk r+L+s+S W+
Peaxi162Scf00650g00223.1 417 NHCQAKLLLGLFN-DGYRVEEIaNNKLVLGWKCRRLLSASIWT 458
*************.******854999****************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MAMMVDETIQ DFDFYGCLST TTTTTSSDND NDHWDAFSGS DNFQDLIESM MLEVNHSSEL 60
VGANANTPPI ISSDEEDDST EDFNGLKLVH LLMAAAEALN KSRELARVIL VRLKELASPN 120
GTTNMERLAA HFTDALQALL DGAKNNMFSK DEQQNQGDVL AAFQLLQDMS PFVKFGHFTA 180
NQAILEAVLH DRRIHIVDYD IMEGIQWASL MQALVSRKDG APNPHLRITA LSRCGNGRRS 240
FGTVQETGRR LTAFAASIGQ PFSFHHCRLD TDETFKPSTL KLVRGEALVI NCMLHLPHFS 300
YRASDSIASF LTGCKTLNPR LLTLVEEELK PIGDEGFVGR FMDTLHHYSA LYDSLEAGFP 360
LQSTSRARAL IERVFLGPRI IGSLARVYRT RGEDERCSWG EWLADGGFRQ SDISFANHCQ 420
AKLLLGLFND GYRVEEIANN KLVLGWKCRR LLSASIWTTS DSDL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975523 | 9e-32 | HG975523.1 Solanum lycopersicum chromosome ch11, complete genome. |
