PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00629g00021.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 461aa    MW: 52299.8 Da    PI: 4.4754
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00629g00021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-184695255
                       AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Peaxi162Scf00629g00021.1 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
                              789******.7*********33....35**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.69E-3145102No hitNo description
PfamPF008471.6E-134695IPR001471AP2/ERF domain
PROSITE profilePS5103219.50646103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-2746102IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-1946103IPR016177DNA-binding domain
SMARTSM003803.2E-3546109IPR001471AP2/ERF domain
PRINTSPR003677.4E-84758IPR001471AP2/ERF domain
PRINTSPR003677.4E-86985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MARKRKLAEG QNEKTHGDQP NAARYEMVKG AETAATLNGA QRARKRFVGV RQRPSGRWVA  60
EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGDNTRT NFWPRSISNL SSTSALPPKI  120
TKLLLSRLKE RNKSLAAAAD SSNFLSLRNV GHQQNQQEEF SNRVVEFSES SYTDYLNDHE  180
DYTIDNNTIT NVSAATSTIQ LVNNYKSSNG DIIEVGYKEE EILGEGNTNI EDIESIDFDF  240
LRKSEEEIDV EIETASQMKG SIAEEIRWDS DEIEEIRMNG KDEIKDKVHT RFTDTGYDNI  300
NTSTSNCPIY NYEDSIGSCY YSPFELAEVL SSMEDGMVYG EETSMVSEDM RRMNYERKFS  360
ASLYAFNGIT ECLKLKMKSG GVLQRERSDQ QLSRLRNACR RSLDEEEGKI EECNIGMTEK  420
KDEDSTRSSL EAVTFSSMES DYDSELSLWS SIDLPPICFV T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1339102971Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754415e-52HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015158904.11e-129PREDICTED: ethylene-responsive transcription factor 7-like
TrEMBLM1CCV01e-127M1CCV0_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000647521e-128(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-22related to AP2 11