PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00599g00047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 296aa MW: 33124.5 Da PI: 9.7209 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.1 | 2.5e-15 | 213 | 271 | 2 | 59 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel.eelkkevakl 59 ++ +r+rr++kNRe+A rsR+RK+a++ eLe + +Le+eN++L ke e+++ ++++l Peaxi162Scf00599g00047.1 213 AAMQRQRRMIKNRESAARSRERKQAYQVELESMAVKLEEENEQLLKEKdERIRAHYKQL 271 5789***************************************9877514566666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-11 | 212 | 277 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-13 | 213 | 271 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 214 | 259 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.53E-15 | 216 | 262 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-9 | 216 | 264 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.1E-13 | 217 | 271 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 219 | 234 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MASTKLISSS ARNSDRRKSS AASSSSSSTM PPYPHDLQQY NNNNNTSIIN NNLEATSRIF 60 HNNNNNIINS NSSSTLLNAE ITLLDAAGAI TPITDTEMVP VPVRKKTVDD VWREIVEGKK 120 EQRKVCKTEA PDEIMTLEDF LVKAGAVEEE AVAGGVVEQG PVKVELGTER LSGGIFGFDS 180 GNMYMAATPQ QSVEGFGNGR GKRKAVLEPL DKAAMQRQRR MIKNRESAAR SRERKQAYQV 240 ELESMAVKLE EENEQLLKEK DERIRAHYKQ LIEKVIPVVE KRRPPPTLRR VRSMQW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004237796.1 | 1e-129 | G-box-binding factor 4 isoform X1 | ||||
Swissprot | P42777 | 7e-50 | GBF4_ARATH; G-box-binding factor 4 | ||||
TrEMBL | A0A3Q7GZ36 | 1e-128 | A0A3Q7GZ36_SOLLC; Uncharacterized protein | ||||
STRING | Solyc04g071510.2.1 | 1e-128 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2771 | 24 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 2e-43 | bZIP family protein |