PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00593g00325.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family EIL
Protein Properties Length: 492aa    MW: 56639.1 Da    PI: 4.9933
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00593g00325.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3383.72.8e-117303631353
                               XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                               ++lkkrmwkd+m+l++lk +++++  +k++++++   +  +eq+rrkkmsraQD+iLkYM+k+mevc+ qGfvYgi+pekgkpv+
  Peaxi162Scf00593g00325.1  30 DDLKKRMWKDRMKLQKLKAKRESSSTSKDPQADEV--QAKEEQSRRKKMSRAQDSILKYMVKIMEVCEGQGFVYGIVPEKGKPVS 112
                               79*********************999999966665..6899******************************************** PP

                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HH CS
                      EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvep 170
                               g+sdsL +WWkekv+f++ +paai++    +l+     +  ++++s  ++l+el D+tl+ LLs+lmqhcdppqr+fple+g++p
  Peaxi162Scf00593g00325.1 113 GSSDSLTEWWKEKVRFEQSAPAAIAEF-LPKLVE----ETIMDATSHINRLEELRDSTLSTLLSTLMQHCDPPQRSFPLERGLAP 192
                               *************************99.445553....34456799*************************************** PP

                               HH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT CS
                      EIN3 171 PWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeek 255
                               PWWPtGkelwwg +gl+k+qg+ppy+kphdlkkawkv+vL+a ik m p+++++r+l+ qs++lq+km+ake++++++ +nqee+
  Peaxi162Scf00593g00325.1 193 PWWPTGKELWWGDQGLAKEQGPPPYRKPHDLKKAWKVTVLAAIIKNMTPHLAKMRRLVTQSRSLQNKMTAKETATWSKLVNQEEA 277
                               ************************************************************************************9 PP

                               -S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXX CS
                      EIN3 256 ecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsete 340
                               ++          +  ++++++s++++e  egk+       ++v+  ++  + +  k+k   ++k+ +++v + cq+s++++s  +
  Peaxi162Scf00593g00325.1 278 LL----------KLTEKSLKISSSEEE-EEGKEYLA-LVPKNVDIFDSSVLRKNDKRKCNFERKITTEDVLYPCQNSNCPQSGLS 350
                               77..........235667778777554.34444433.33444444344334444445677889999999**************** PP

                               XXXXXXXXXXXXX CS
                      EIN3 341 lifadknsisqne 353
                               ++f dkn + ++e
  Peaxi162Scf00593g00325.1 351 FGFLDKNTRIEHE 363
                               *******998886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.7E-10930276No hitNo description
Gene3DG3DSA:1.10.3180.102.0E-61152282IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.97E-54157279IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MVEFHEINEP LSPMAEFFEF EEDQEDISYD DLKKRMWKDR MKLQKLKAKR ESSSTSKDPQ  60
ADEVQAKEEQ SRRKKMSRAQ DSILKYMVKI MEVCEGQGFV YGIVPEKGKP VSGSSDSLTE  120
WWKEKVRFEQ SAPAAIAEFL PKLVEETIMD ATSHINRLEE LRDSTLSTLL STLMQHCDPP  180
QRSFPLERGL APPWWPTGKE LWWGDQGLAK EQGPPPYRKP HDLKKAWKVT VLAAIIKNMT  240
PHLAKMRRLV TQSRSLQNKM TAKETATWSK LVNQEEALLK LTEKSLKISS SEEEEEGKEY  300
LALVPKNVDI FDSSVLRKND KRKCNFERKI TTEDVLYPCQ NSNCPQSGLS FGFLDKNTRI  360
EHETSCSYRE NGGLNNQENI KTEDQFEMSI NNFPGLNIEA QMLSREEWIA RGEIAPQYLM  420
NMEIRRSFNN YHAQIADGGK ILKNFESYMG DDVLEQLLCD QTTYGNMNLE ETPSEDVLNQ  480
EAAVTFWDCV GG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-561562804128Protein ETHYLENE INSENSITIVE 3
4zds_B7e-561562804128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015162960.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-127EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1U7Y0I70.0A0A1U7Y0I7_NICSY; putative ETHYLENE INSENSITIVE 3-like 4 protein
STRINGXP_009792280.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-117EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]