PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00592g00446.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 475aa    MW: 53548.4 Da    PI: 5.4118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00592g00446.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.62e-12275321354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h + Er+RR ++N+++  Lr++ P++      K++ a+i++ A++YI++L
  Peaxi162Scf00592g00446.1 275 TKHFATERQRRVHLNDKYKALRSMHPNP-----SKNDRASIVKDAIDYINEL 321
                               78*************************9.....7***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.67E-14269339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.691272321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9275321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-12275333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.64E-11275325No hitNo description
SMARTSM003533.5E-8278327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MYVQSACYDP TNVQHEGVLT EDVFGIEEHH NNYHNSTQQA DAAVVAAAAM EMELQQQLNL  60
ELEQCYNTHN NNMQHLVHES NNQGLSCDQS NNWGEMNFPP YQNQEHNNSN NFQHATHDMQ  120
NVQQQNFPEA PYLPTPPDLL NMFPLPSSSI SFANNTANQS SNLLTSLGLL GDINIPSTDG  180
ASTSSAVYDP SLLPLNLPPQ PPLLRELFHS LPHGYGLRNL RNTSSNFFNG MDQEREVSGG  240
LYQDGEGIRP FDNGIFEFSA DMNGIVKNKD GNKDTKHFAT ERQRRVHLND KYKALRSMHP  300
NPSKNDRASI VKDAIDYINE LKREVNELKL MVEKKRCNRD RIKRQKTEGG NSLDGTDAKQ  360
MDEVDQSFNG NSLRSSWLQR RSKNTEVDVR IVDDEVTVKL VQQKRINCLL FASKVLDELQ  420
LDLHHVAGGL IGDYYSFLFN SKICEGSTVY ASAIAKKLIE VVDIQYAAIA PTNSY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754401e-134HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009788149.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_016475217.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A1S4AEW60.0A0A1S4AEW6_TOBAC; transcription factor bHLH91-like
TrEMBLA0A1U7XMH40.0A0A1U7XMH4_NICSY; transcription factor bHLH91-like
STRINGXP_009788149.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.13e-82bHLH family protein