PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00578g00008.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 220aa    MW: 25078.4 Da    PI: 8.619
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00578g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.3e-151457144
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                              +g+WT+eEd ll ++++++G g W+ +  + g++R++k+c++rw
  Peaxi162Scf00578g00008.1 14 KGSWTEEEDILLRKCIEKYGEGKWHQVLVRAGLNRCRKSCRLRW 57
                              799***************************************** PP
2Myb_DNA-binding262.1e-0856792347
                              -HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                              +W++Ia +++ gRt++++k++w++ 
  Peaxi162Scf00578g00008.1 56 RWSLIAGRLP-GRTANDVKNYWNTN 79
                              4*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.863965IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.9E-151256IPR009057Homeodomain-like
SMARTSM007173.3E-141382IPR001005SANT/Myb domain
SuperFamilySSF466898.2E-171376IPR009057Homeodomain-like
PfamPF002491.7E-131457IPR001005SANT/Myb domain
CDDcd001671.37E-111680No hitNo description
Gene3DG3DSA:1.10.10.607.1E-105780IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MKTSVFTSSG VLRKGSWTEE EDILLRKCIE KYGEGKWHQV LVRAGLNRCR KSCRLRWSLI  60
AGRLPGRTAN DVKNYWNTNL LTRSKFGPPQ QHDRKCPKAI KTMAKNAIIR PQPWNLSKLA  120
KNNVSTIHKD EHSKQEIIIE KPTTAEVVSR DENVEWWTNL LLDNSNGFEK EATESTSAFQ  180
NIESLLNEEL LSPSINGGTY YPMQETGDMG WSDLSIDADL
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ4281040.0HQ428104.1 Petunia x hybrida cultivar Mitchell AN4 gene, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019256541.16e-58PREDICTED: transcription factor MYB113-like
SwissprotQ9FNV92e-33MY113_ARATH; Transcription factor MYB113
TrEMBLE9N6661e-146E9N666_PETHY; Anthocyanin 4
STRINGXP_009626596.13e-55(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-35myb domain protein 113
Publications ? help Back to Top
  1. Li T, et al.
    Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis.
    Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83
    [PMID:25450360]
  2. Mondal SK,Roy S
    Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
    J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
    [PMID:28490275]