PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00572g00055.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 348aa    MW: 38950.1 Da    PI: 9.8421
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00572g00055.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31281339259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +d +++++tYegeHnh+
  Peaxi162Scf00572g00055.1 281 ADEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLDDSSMLIVTYEGEHNHQ 339
                               69************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105339.4E-18233278IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.805.2E-34268340IPR003657WRKY domain
PROSITE profilePS5081129.792275341IPR003657WRKY domain
SuperFamilySSF1182904.45E-27278340IPR003657WRKY domain
SMARTSM007748.8E-39280340IPR003657WRKY domain
PfamPF031063.2E-27282339IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEEIEEANKA AVETCYRVMS LLSSRPTDQN QYVNLVRETG EAVHKFKKVV TLLNSTLGHA  60
RVRKMNKFRT PLPHNILVEN PSCKTDDHSK ALRLLPLNTP EDSVLEMGAN VKCNLTLGSP  120
ALELSSNGRN PLNLGQQTPF PSYHFLQQQQ QQQHRRFQLH QEQLKQPAEM IYRRSNSGIS  180
LNFDSSTCTP TMSSTRSFIS SLSVDGSVAN LDGNAFNLTG ASHSADQSSF QHKRRCSGMG  240
DEGSVKCGSI GRCHCSKKRK HRVKRSIKVP AISNKLADIP ADEYSWRKYG QKPIKGSPHP  300
RGYYKCSSMR GCPARKHVER CLDDSSMLIV TYEGEHNHQR LPSQSANA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21273342775WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001315198.10.0WRKY transcription factor 21
SwissprotO043361e-113WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A0V0IKS30.0A0A0V0IKS3_SOLCH; Putative WRKY transcription factor 21-like
STRINGSolyc06g008610.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32712350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-114WRKY DNA-binding protein 21