PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Peaxi162Scf00548g00014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 183aa MW: 21443 Da PI: 10.8496 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.6 | 7.3e-10 | 78 | 130 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+ +NRe+ArrsR RK++ +e+L++ v + N++L +++ ++ +v+ Peaxi162Scf00548g00014.1 78 RKKRRMVSNRESARRSRMRKQQHLENLRNQVNRSKLGNRELMNRVRFMTHQVQ 130 68899***************************999999999887776666665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.8E-13 | 74 | 138 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.0E-4 | 76 | 123 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.818 | 76 | 139 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.7E-10 | 78 | 130 | No hit | No description |
SuperFamily | SSF57959 | 1.45E-10 | 78 | 129 | No hit | No description |
CDD | cd14702 | 4.08E-12 | 79 | 128 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 81 | 96 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence Send to blast |
MRRKTKDQEP VCSPKQSTPP PEPVLSNSGS GSDDSKPDSF HSSSGSDEPP DRNNNNYINS 60 NCGSKRPRMT PNRDVDERKK RRMVSNRESA RRSRMRKQQH LENLRNQVNR SKLGNRELMN 120 RVRFMTHQVQ LVECDNERLR TDSAVLRQRL EDIRQILIAR QLEQQFSYHS AWACNNMELQ 180 RPL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 90 | 97 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560923.1 | 9e-76 | PREDICTED: light-inducible protein CPRF2-like | ||||
TrEMBL | A0A2G2XH87 | 3e-75 | A0A2G2XH87_CAPBA; Uncharacterized protein | ||||
STRING | PGSC0003DMT400055214 | 2e-68 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22850.2 | 9e-25 | basic leucine-zipper 6 |